Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04916 and BL00733

See Amino acid alignment / Visit BSNT_04916 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:06
# Commandline: needle
#    -asequence dna-align/BSNT_04916___yirB.1.5803.seq
#    -bsequence dna-align/BL00733.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04916___yirB-BL00733.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04916___yirB-BL00733.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04916___yirB
# 2: BL00733
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 177
# Identity:     120/177 (67.8%)
# Similarity:   120/177 (67.8%)
# Gaps:          24/177 (13.6%)
# Score: 399.0
# 
#
#=======================================

BSNT_04916___      1 ATGAGAGAATTGGACGAAATGATTAGCCGCTTGCGAAACAGAGGAATCAA     50
                     ||||.||||.|.||.||.|||||.||.|||.||||.|.|||.|||||.||
BL00733            1 ATGAAAGAAATCGATGACATGATCAGGCGCCTGCGCAGCAGGGGAATTAA     50

BSNT_04916___     51 AGTGGAGAAAGTCAAATATCCGAAGCA-GACCTTGTCAGAGAAAAAATGG     99
                     .|||||.|||||.||||||||.||||| |.|| |||..||.||.||||||
BL00733           51 GGTGGACAAAGTTAAATATCCAAAGCACGTCC-TGTGCGAAAAGAAATGG     99

BSNT_04916___    100 GTTCATCAATGCAAACAGCCGCTCAAAACA-----------AATTACAGA    138
                             ||| |||.|||  |..||||||           |..|||.|.
BL00733          100 --------ATG-AAAAAGC--CAAAAAACACAGTGAAGCCGAGCTACCGG    138

BSNT_04916___    139 GATTTTAACGGCTATTCTTTCACATAA    165
                     |||||.|||||||||||.||.|.||.|
BL00733          139 GATTTCAACGGCTATTCGTTTATATGA    165


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