Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04921 and BL00747

See Amino acid alignment / Visit BSNT_04921 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:06
# Commandline: needle
#    -asequence dna-align/BSNT_04921___gerAA.1.5803.seq
#    -bsequence dna-align/BL00747___gerAA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04921___gerAA-BL00747___gerAA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04921___gerAA-BL00747___gerAA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04921___gerAA
# 2: BL00747___gerAA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1528
# Identity:    1015/1528 (66.4%)
# Similarity:  1015/1528 (66.4%)
# Gaps:         164/1528 (10.7%)
# Score: 3255.0
# 
#
#=======================================

BSNT_04921___      1 TTGGAACAAACAGAGTTTAAGGAATATATACACGATAATTTAGCATTGGT     50
                     .||...|||.|.||.||.||||||.|.||.||.||.|||.|.|||.||.|
BL00747___ger      1 ATGACTCAATCGGAATTCAAGGAACACATCCATGAAAATCTCGCAATGCT     50

BSNT_04921___     51 GCTGCCAAAATTAAAAGAAAACGATGATCTGGTGAAAAACAAAAAAATGC    100
                     .||.||..|..|..|..|.||||||||||||.|..||||.||||||||||
BL00747___ger     51 CCTTCCCCATCTCGAGCATAACGATGATCTGATTCAAAATAAAAAAATGC    100

BSNT_04921___    101 TTGCGAACGGACTGGTTTTTTACTATCTCTATTTCAGTGAACTGACTGAT    150
                     |....||||||.|..|||||||||.|.|.||.||.|..||..|||.||||
BL00747___ger    101 TGAAAAACGGAATCATTTTTTACTTTTTGTACTTTAAAGATTTGAATGAT    150

BSNT_04921___    151 GAGAATAAGGTGTCAGAAG--------------------CCATTAAAACT    180
                     ||.||.||..| .||||||                    |.||.|.|.||
BL00747___ger    151 GACAAGAAAAT-CCAGAAGGCTGCGAAATTGCTTGTCTCCGATGACAGCT    199

BSNT_04921___    181 ----TTAATTAAAGATGAGGAGACCTTAACGCTTGACCAGGTCAAAAAAC    226
                         ||.|||     .|||||            ||.||.|.||      |
BL00747___ger    200 CCTATTCATT-----GGAGGA------------TGTCCGGCTC------C    226

BSNT_04921___    227 GCCTTGACCAGCTTGACGCAAGACCTGTTGAAACCGCAAAAA---AAACG    273
                     ||.|..||.||||..|.||...|||.|||   ||.|||||||   |..||
BL00747___ger    227 GCTTAAACAAGCTGAATGCGGAACCCGTT---ACAGCAAAAAAGGACGCG    273

BSNT_04921___    274 ATTGAATCGATTCTCAACGGCAATTGTGCTG-TGTTTATCAACGGATTGG    322
                     |||.|..|.||..||||.||.||.||| ||| ||||.||||||||.|||.
BL00747___ger    274 ATTAACGCAATCTTCAAAGGAAAATGT-CTGCTGTTGATCAACGGTTTGA    322

BSNT_04921___    323 ATAAAGCCTATATT----CTGACCACAGGAAAGAAAAAAACAAGAAGCCT    368
                     |||    ||.||||    |||.|.||||...|||||||.|.|||||||||
BL00747___ger    323 ATA----CTGTATTTGCACTGCCGACAGCTGAGAAAAAGAAAAGAAGCCT    368

BSNT_04921___    369 GACAGAGCCGACAACTGAAATAGTGGTTCGCGGCCCAAAAGTAGCGTTTG    418
                     ...|||...||..||.||||..||.||..|.|||||.|||||.|..|||.
BL00747___ger    369 TGGAGAAGTGAATACAGAAAACGTCGTCAGAGGCCCGAAAGTCGGTTTTA    418

BSNT_04921___    419 TAGAGGATATCGATACAAATCTCGCTCTGATTA--------------GAC    454
                     |.||||||.|||||||||||.|.|||||..|.|              ||.
BL00747___ger    419 TCGAGGATGTCGATACAAATGTGGCTCTAGTCAGGCAGCGTGTCCCGGAT    468

BSNT_04921___    455 AAAGAACCTCTCATCCGAAATTGATCACCAAAAAAATCATGATCGGCGAA    504
                     |||||||              |||.|....||||||||..|.|||||.|.
BL00747___ger    469 AAAGAAC--------------TGACCGTGGAAAAAATCCCGCTCGGCAAG    504

BSNT_04921___    505 AACAAGCTGAAGCCCGCAGCCATTATGTACATTGAAGGCAAAGCAAAAAA    554
                     |.||||.|.||...|||..|||||.|.||.||..|.||||||||..|..|
BL00747___ger    505 AGCAAGTTTAAAGACGCGACCATTCTCTATATCCAGGGCAAAGCGGACGA    554

BSNT_04921___    555 GTCCGTCATAAAAGAAGTGAAGGCGCGGCTTAAAAATATCCAGCTGGAAG    604
                     .||..||||.|||||..|.||...|||.||.|||||..|.||||||||.|
BL00747___ger    555 TTCGATCATCAAAGATCTTAAAAAGCGCCTGAAAAAAGTTCAGCTGGATG    604

BSNT_04921___    605 ATATCCAGGACAGCGGAACG--CTCGAGGAACTCATTGAAGATAATAAAT    652
                     ||||.||.||.|.|||  ||  ||.||.|||.|.||.|||||||||||.|
BL00747___ger    605 ATATTCAAGATACCGG--CGTTCTTGAAGAATTAATCGAAGATAATAAGT    652

BSNT_04921___    653 ATTCACCATTTCCGCAGATTCAAAATACGGAAAGACCTGACAAAGTATCT    702
                     |.||.||.|||||||||||.||.|||||.||||||||||||||.||.|||
BL00747___ger    653 ACTCGCCGTTTCCGCAGATCCAGAATACCGAAAGACCTGACAAGGTTTCT    702

BSNT_04921___    703 TCAGCCCTGTTTAACGGCCGTGTGGCAATTTTGGTCGATGGTTCACCATT    752
                     |||||.||||||||.||.||..|.||||||||.||.|||...||.|||||
BL00747___ger    703 TCAGCGCTGTTTAATGGACGGATCGCAATTTTTGTTGATTACTCGCCATT    752

BSNT_04921___    753 TGTGCTGCTGGTGCCGGTTTCTCTCGGCATCCTGATGCAATCCCCGGATG    802
                     ||..|||.|.|||||||.||||.||||.||..|||||||.||||||||.|
BL00747___ger    753 TGCCCTGATCGTGCCGGCTTCTTTCGGAATGGTGATGCAGTCCCCGGACG    802

BSNT_04921___    803 ACTACTATGAACGCTGGAT-------------TTCAGCATCTCTTATCCG    839
                     |.|..||.|||.|.|||||             .|||| ||.||||   ||
BL00747___ger    803 ATTTTTACGAAAGATGGATCGCCACGACCTTGATCAG-ATTTCTT---CG    848

BSNT_04921___    840 GTCGCTGCGCTATGCTTCTATCTTTATCACCTTGTTTTTGTCATCGATTT    889
                     ||        |..| |||.||.||.||||||.||||..|.||..||.|||
BL00747___ger    849 GT--------TCAG-TTCGATTTTCATCACCCTGTTCCTATCGGCGTTTT    889

BSNT_04921___    890 ATATAGCACTTGTTTCCTTCCATCAGGGGCTGCTGCCGACCGCGCTCGCC    939
                     ||||..|.|||||.||.||.|||||.||..||||||||||.||.|||||.
BL00747___ger    890 ATATTTCGCTTGTATCTTTTCATCAAGGCATGCTGCCGACGGCTCTCGCT    939

BSNT_04921___    940 GTTACAATTTCGGCGAACA---GGGAAAACGTGCCGTTCCCTCCGATATT    986
                     |||||.|||   ||||.||   |.|||||.||||||||.||.|||.|..|
BL00747___ger    940 GTTACGATT---GCGAGCACGCGCGAAAATGTGCCGTTTCCGCCGCTCCT    986

BSNT_04921___    987 TGAAGCCCTGCTGATGGAAGTCACCATCGAGCTGCTAAGGGAAGCCGGAC   1036
                     ||||||.|||.|.||||||||.||.||||||||..||.|||||||.||||
BL00747___ger    987 TGAAGCGCTGATTATGGAAGTGACGATCGAGCTCTTACGGGAAGCGGGAC   1036

BSNT_04921___   1037 TGCGACTCCCCAATCCGCTCGGACAGACGATCGGCCTCGTTGGGGGCGTA   1086
                     ||||.||.|||||||||||.||.|||||||||||||||||.||.|||||.
BL00747___ger   1037 TGCGGCTTCCCAATCCGCTAGGCCAGACGATCGGCCTCGTGGGAGGCGTC   1086

BSNT_04921___   1087 GTCATCGGACAGGCTGCTGTAGAAGCGAATCTCGTCAGTTCGATTATGGT   1136
                     ||||||||.|||||.||.||.|||||.|||.|||||||.||..|.|||||
BL00747___ger   1087 GTCATCGGCCAGGCGGCGGTCGAAGCAAATATCGTCAGCTCTGTGATGGT   1136

BSNT_04921___   1137 CATTGTCGTCAGTGTCATTGCCCTGGCATCCTTTACCGTTCCTCAATACG   1186
                     .||..|||||||..|.||.|||||.||.||.|||||.||.||.||.||||
BL00747___ger   1137 GATCATCGTCAGCATTATCGCCCTTGCTTCATTTACTGTGCCGCAGTACG   1186

BSNT_04921___   1187 GAATGGGTCTGTCTTTCCGGGTGCTGCGTTTTATTTCGATGTTTTCCGCC   1236
                     |.|||||.|||||.||.||.|||||.|||||||||||.|||.|..|.||.
BL00747___ger   1187 GCATGGGCCTGTCGTTTCGCGTGCTTCGTTTTATTTCCATGGTGGCTGCA   1236

BSNT_04921___   1237 GCTATTTTAGGGCTGTACGGCATTATTTTATTTATGCTTGTCGTTTATAC   1286
                     ||..|.||.|||||.|||||.||.||.||.|..|||||.|.|.|.|..||
BL00747___ger   1237 GCCGTGTTCGGGCTTTACGGGATCATATTGTGCATGCTCGCCATCTTCAC   1286

BSNT_04921___   1287 GCACTTAACGAGACAAACGAGCTTTGG-GTCTCCGTATTTTTCGCCAAAC   1335
                     .||.||..|.||.||||..|||||.|| .|| |||||||||...||.|||
BL00747___ger   1287 CCATTTGGCTAGGCAAAGAAGCTTCGGCATC-CCGTATTTTAACCCGAAC   1335

BSNT_04921___   1336 GGATTCTTT-AGCCTGAAAAATACGGATGACTCCATTATCCGTCTCCCAA   1384
                      .|||.||| |||.|.|||.||||||||||..|||||||.|||||.||||
BL00747___ger   1336 -CATTTTTTCAGCTTAAAACATACGGATGAAGCCATTATTCGTCTGCCAA   1384

BSNT_04921___   1385 TTAAAAACAAACCAAAA------GAGGCGAA---TAATCCAAAT-GAGCC   1424
                                 |||||      ||||.|||   |||   |||| ||.||
BL00747___ger   1385 ------------CAAAAGCTCGGGAGGTGAACCGTAA---AAATGGATCC   1419

BSNT_04921___   1425 AAAAA--CAGACTCCA-CTGAAACTTAA   1449
                     |||||  ||| |.|.| |.||   |||.
BL00747___ger   1420 AAAAAATCAG-CACGATCGGA---TTAG   1443


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