Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04909 and BL00751
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:05
# Commandline: needle
# -asequence dna-align/BSNT_04909___mrgA.1.5803.seq
# -bsequence dna-align/BL00751___mrgA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04909___mrgA-BL00751___mrgA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04909___mrgA-BL00751___mrgA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04909___mrgA
# 2: BL00751___mrgA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 492
# Identity: 329/492 (66.9%)
# Similarity: 329/492 (66.9%)
# Gaps: 57/492 (11.6%)
# Score: 1033.0
#
#
#=======================================
BSNT_04909___ 1 ATG-------AAAACTGAAAAC-GCAAAAACAAATCAAACATTAGTTGAG 42
||| ||.|.|.||||| ||||||.| |..||.||||.
BL00751___mrg 1 ATGATCTCTCAACAATTAAAACAGCAAAATC--------CTGTACTTGAA 42
BSNT_04909___ 43 AATTCACTGAACACACAATTATCAAACTGGTT--TCTTTTATACTCTAAG 90
||.|||.||||.||..|.||.||||||||||| ||.|| |||.|.|||
BL00751___mrg 43 AACTCAATGAATACGAATTTGTCAAACTGGTTCATCCTT--TACACGAAG 90
BSNT_04909___ 91 CTCCACCGTTTCCATTGGTATGTGAAAGGGCCTCATTTCTTTACATTGCA 140
||.||||||||.||.|||||.||.||||||||.||.||||||||..|.||
BL00751___mrg 91 CTTCACCGTTTTCACTGGTACGTAAAAGGGCCGCAGTTCTTTACCCTACA 140
BSNT_04909___ 141 CGAGAAATTTGAAGAACTTTATGACTATGCGGCTGAAACAGTGGATACCA 190
.||.|||||||||||.||.||..||.|||||.|.|||||||..|||...|
BL00751___mrg 141 TGAAAAATTTGAAGAGCTATACAACCATGCGTCAGAAACAGCAGATGTGA 190
BSNT_04909___ 191 TCGCTGAGCGCCTGCTGGCGATTGGCGGACAGCCTGTTGCCACAGTGAAA 240
||||.||.|||.|||||||.||.|||||||||||..|.||||||.|||||
BL00751___mrg 191 TCGCGGAACGCTTGCTGGCCATCGGCGGACAGCCGCTCGCCACAATGAAA 240
BSNT_04909___ 241 GAATACACTGAGCATGCATCTATCACAGACGGCGGAAA-------CGAAA 283
|||||||.|||.||.| .|||| |..|.||||| |||||
BL00751___mrg 241 GAATACATTGACCACG------GCACA-ATTGAGGAAAACGGAGCCGAAA 283
BSNT_04909___ 284 CATCAGCATCAGAAATGGTACAAGCATTGGTAAACGACTACAAACAAATC 333
.|.|.||...|||||||||....|||.||||||.|||.|||...|||||
BL00751___mrg 284 AAACGGCCGAAGAAATGGTTTCCGCACTGGTAAGCGATTACCGTCAAAT- 332
BSNT_04909___ 334 AGCAGCGAATCT-AAATTCGTG------ATCGGCCTGGCTGAAGA-AAAT 375
|.|||| | |||||| .| ||||..||.||.||||| ||||
BL00751___mrg 333 --CCGCGA---TGAAATTC-AGCATACCATCGAACTTGCGGAAGATAAAT 376
BSNT_04909___ 376 CAAGACAATGCGACAGCGGACTTGTTTGTCGGATTAATTGAAGAAGTTGA 425
| |||..||.|.||.||.|||.|.|.|.|||...|.|..||.|||.||||
BL00751___mrg 377 C-AGATCATTCTACCGCTGACCTTTATATCGCCCTGACAGAGGAAATTGA 425
BSNT_04909___ 426 AAAACAAGTGTGGATGCTTTCCTC-TTACTTAGGATAA---- 462
.||.||..|.|||||||||||.|| || ||.|||.||
BL00751___mrg 426 TAAGCAGATTTGGATGCTTTCTTCATT--TTTGGACAAGTAA 465
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