Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03497 and BL00771

See Amino acid alignment / Visit BSNT_03497 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:29
# Commandline: needle
#    -asequence dna-align/BSNT_03497___xerD.1.5803.seq
#    -bsequence dna-align/BL00771___xerD.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03497___xerD-BL00771___xerD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03497___xerD-BL00771___xerD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03497___xerD
# 2: BL00771___xerD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 912
# Identity:     674/912 (73.9%)
# Similarity:   674/912 (73.9%)
# Gaps:          42/912 ( 4.6%)
# Score: 2441.5
# 
#
#=======================================

BSNT_03497___      1 GTGAAAGATCAAATAAAGGATTTCATCCACTACGTCATGGTAGAGAGAGG     50
                     |||||||.|||.||.||.||.||.||||||||||.|.|.||.||..|.||
BL00771___xer      1 GTGAAAGTTCATATTAAAGACTTTATCCACTACGCCGTTGTTGAACGGGG     50

BSNT_03497___     51 GCTCTCTCAAAATACGATCGTATCCTATGAACGTGACTTGAAAAGCTATT    100
                     |||.||.||.||.|||.|.||...|||||||||.||.|||||.|||||..
BL00771___xer     51 GCTTTCCCACAACACGGTTGTGAGCTATGAACGGGATTTGAACAGCTACG    100

BSNT_03497___    101 CTCTCTACTTAACAGA-------------AACCCTTCATGTTACAGATTG    137
                     |...|||.|||...||             |.|.|||           |||
BL00771___xer    101 CCGCCTATTTAGAGGAGCAGGAGCAGCTGAGCTCTT-----------TTG    139

BSNT_03497___    138 GAATCACGTTACCCGCATACATATTATCCAATACTTAAAGCATTTGAAGG    187
                       |.||.||.||..|..|.||.||.|||||.|..||.||||||||.||.|
BL00771___xer    140 --ACCAGGTGACAAGGCTGCACATCATCCAGTTTTTGAAGCATTTAAAAG    187

BSNT_03497___    188 ACTCGGGGAAATCCGGCAAGAC-ATCGGCGCGGCATTTGGCATCCATTCG    236
                     ||.|.||.||||||||.||||| .|| |||.|||||.|.||.|||||.||
BL00771___xer    188 ACGCCGGAAAATCCGGAAAGACGGTC-GCGAGGCATCTCGCTTCCATCCG    236

BSNT_03497___    237 CTCTTTTCATCAATTTCTGCTCAGGGAAAAAGTAACGGATAAGGACCCTT    286
                     |...|||||.||.||||||||.|||||||||||.||||...|||||||.|
BL00771___xer    237 CAGCTTTCACCAGTTTCTGCTGAGGGAAAAAGTGACGGCCCAGGACCCGT    286

BSNT_03497___    287 CCGTTCATATCGAAACACAAAAGACGGAACGGGCGCTTCCGAAGGTGCTC    336
                     ||||.|||||.|||.|.|||||.|||||||||.|.||||||||||||||.
BL00771___xer    287 CCGTCCATATTGAATCGCAAAAAACGGAACGGACCCTTCCGAAGGTGCTG    336

BSNT_03497___    337 GCACTCAATGAAGTCG-AGCGATTATTGGACACGCCTAAGCTGACGAGCC    385
                     .||.|..|.||||||| |.||.|| |||||.|||||.|||||||||.|.|
BL00771___xer    337 TCATTACAGGAAGTCGAAACGCTT-TTGGATACGCCGAAGCTGACGGGGC    385

BSNT_03497___    386 CTTTCGGATATCGGGATAAAGCAATGCTGGAGCTGCTTTATGCGACAGGC    435
                     |.|||||.||.||.||||||||||||||||||.|..|.|||||||||||.
BL00771___xer    386 CGTTCGGCTACCGCGATAAAGCAATGCTGGAGTTATTGTATGCGACAGGA    435

BSNT_03497___    436 ATACGAGTCAGTGAAATGATTGAGTTGAAAAC-GACAGATGTTCATTTAT    484
                     ||.||.|||||.||.|||||.|..|| |||.| |.|.|||||.|||||||
BL00771___xer    436 ATCCGCGTCAGCGAGATGATCGCATT-AAAGCTGTCCGATGTCCATTTAT    484

BSNT_03497___    485 CTATGGGGTTTGTCCGATGCTTCGGCAAAGGAAGAAAAGAACGGATTGTG    534
                     |.|||||.|||.||||.||||||||.|||||||||||.||.|||||.||.
BL00771___xer    485 CGATGGGCTTTATCCGCTGCTTCGGGAAAGGAAGAAAGGAGCGGATCGTT    534

BSNT_03497___    535 CCAATTGGTGAAGC--CGCCGCTTCCGCCATTGAGGAATATATGACAAAA    582
                     ||..|.||.|||||  ||.|.|.|  ||..|.|..||||||.||.|||||
BL00771___xer    535 CCGCTCGGCGAAGCGGCGTCACAT--GCGGTCGGCGAATATCTGTCAAAA    582

BSNT_03497___    583 GCCAGGGGAAAACTGTT---AAAAAATAATGTATCTGACGCCCTCTTTTT    629
                     ||.|||||.||.||.||   ||||||||..|.|   ||||||||.|||.|
BL00771___xer    583 GCGAGGGGCAAGCTTTTGAAAAAAAATACCGAA---GACGCCCTGTTTCT    629

BSNT_03497___    630 AAATCATCACGGCAAACAGATCAGCCGCCAGGGATTTTGGAAGAACCTGA    679
                     .|||||.|||||||.|||.||.|||||||||||.||||||||.||..|.|
BL00771___xer    630 GAATCACCACGGCAGACAAATGAGCCGCCAGGGGTTTTGGAAAAATTTAA    679

BSNT_03497___    680 AAAAAATCGCGTTGGAAGCCGGCATTAAGAAAGAGCTGACTCCGCATACA    729
                     |.||||||||.||||||||.||.|||||.|||||||||||.|||||.||.
BL00771___xer    680 AGAAAATCGCTTTGGAAGCGGGAATTAATAAAGAGCTGACGCCGCACACG    729

BSNT_03497___    730 CTCAGGCATTCCTTTGCGACGCATCTGCTTGAGAACGGGGCAGATTTAAG    779
                     ||.|||||.||.||.||.||.||..||||.||.|||||.||.|||.|..|
BL00771___xer    730 CTGAGGCACTCATTCGCCACACACTTGCTCGAAAACGGAGCCGATCTCCG    779

BSNT_03497___    780 AGCGGTGCAGGAAATGCTCGGTCATGCGGATATATCCACAACGCAAATTT    829
                     .||.||.||||||||||||||.||.||.||.||.||.||.||||||||||
BL00771___xer    780 GGCCGTTCAGGAAATGCTCGGACACGCCGACATTTCGACGACGCAAATTT    829

BSNT_03497___    830 ATACGCATGTGACGAAAACAAGGCTGAAGGATGTGTACAAGCAGTTTCAT    879
                     |||||||.||||||||||||||||||||.||||||||.|.|||.|..|||
BL00771___xer    830 ATACGCACGTGACGAAAACAAGGCTGAAAGATGTGTATAGGCAATACCAT    879

BSNT_03497___    880 CCGCGAGCATAG    891
                     ||.||.||||||
BL00771___xer    880 CCCCGTGCATAG    891


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