Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

DNA alignment: BSNT_03491 and BL00776

See Amino acid alignment / Visit BSNT_03491 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:28
# Commandline: needle
#    -asequence dna-align/BSNT_03491___spoIIAA.1.5803.seq
#    -bsequence dna-align/BL00776___spoIIAA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03491___spoIIAA-BL00776___spoIIAA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03491___spoIIAA-BL00776___spoIIAA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03491___spoIIAA
# 2: BL00776___spoIIAA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 364
# Identity:     275/364 (75.5%)
# Similarity:   275/364 (75.5%)
# Gaps:          20/364 ( 5.5%)
# Score: 1013.0
# 
#
#=======================================

BSNT_03491___      1 ATGAGCCTTGGAATTGACATGAATGTCAAAGAATCTGTGCTTTGTATTCG     50
                     ||||||||.|||||.||.||..|.|||||||||||.||..|.||.|||||
BL00776___spo      1 ATGAGCCTCGGAATCGATATTCACGTCAAAGAATCCGTATTATGCATTCG     50

BSNT_03491___     51 ATTAACAGGCGAACTCGATCACCATACGGCTGAAACCCTGAAGCAAAA--     98
                     .||.|||||.|||||||||||||||||.||.||||||.|||  .||||  
BL00776___spo     51 GTTGACAGGTGAACTCGATCACCATACAGCAGAAACCTTGA--GAAAACA     98

BSNT_03491___     99 ----AGTGACTCAATCAT-TGGAGAAGGATGATATTCGCCATATCGTGCT    143
                         ||||||     ||| ||||..|....||.|||||||||||.||..|
BL00776___spo     99 AGTCAGTGAC-----CATCTGGAACAAACCGACATTCGCCATATTGTCAT    143

BSNT_03491___    144 GAA-CTTGGAGGACCTTTCCTTTATGGACAGCTCGGGGCTTGGCGTTATT    192
                     ||| ||||.| ||||||||.|||||||||||.||.|||||||||||..|.
BL00776___spo    144 GAATCTTGCA-GACCTTTCGTTTATGGACAGTTCAGGGCTTGGCGTCGTG    192

BSNT_03491___    193 TTAGGAAGATACAAGCAAATTAAGCAAATTGGCGGGGAAATGGTCGTTTG    242
                     .|.||.|||||.|||.|.||||||||..|.|||||.||||||.||||.||
BL00776___spo    193 CTCGGCAGATATAAGGAGATTAAGCAGCTCGGCGGAGAAATGATCGTCTG    242

BSNT_03491___    243 CGCTATCTCTCCTGCGGTGAAGCGATTGTTTGATATGTCGGGTCTGTTTA    292
                     |||.||.||.|||||.||.||.||.||.|||||||||||.||.|||||||
BL00776___spo    243 CGCCATTTCCCCTGCTGTCAAACGTTTATTTGATATGTCCGGGCTGTTTA    292

BSNT_03491___    293 AAATTATCCGATTTGAACAATCTGAACAGCAGGCGCTCCTGACAC--TGG    340
                     ||||.||.||..||||.|||||.||.||||  |.||.|.|||.||  |||
BL00776___spo    293 AAATCATTCGCCTTGAGCAATCAGAGCAGC--GTGCACTTGAAACGTTGG    340

BSNT_03491___    341 GGGTGGCATCATGA    354
                     |||||||.||||||
BL00776___spo    341 GGGTGGCGTCATGA    354


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.