Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04951 and BL00835

See Amino acid alignment / Visit BSNT_04951 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:08
# Commandline: needle
#    -asequence dna-align/BSNT_04951.1.5803.seq
#    -bsequence dna-align/BL00835.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04951-BL00835.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04951-BL00835.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04951
# 2: BL00835
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 203
# Identity:     114/203 (56.2%)
# Similarity:   114/203 (56.2%)
# Gaps:          55/203 (27.1%)
# Score: 337.0
# 
#
#=======================================

BSNT_04951         1 -------------ATGA---------TCAGAAA-------AAAA---CTC     18
                                  ||||         |.|||||       ||||   |.|
BL00835            1 GTGAGTCTGCACGATGAAAAAGAGATTGAGAAATTGCTGGAAAATTTCAC     50

BSNT_04951        19 AGCAATACGTCCTATCA----------AGAAAGAGAAGATTTAGAGCAAG     58
                     |.|.||      .||||          |||.||.||.|||.|.||.||.|
BL00835           51 ACCGAT------GATCAAAAGCAAATTAGAGAGGGAGGATCTTGAACAGG     94

BSNT_04951        59 AGCTGAAGATCAAAATGTTTGAAAAGGCTGATATGCTTTTGTGTCAGGAT    108
                     ||||||||||.||.||.|..|||||.||.||.||||||||.|||||.||.
BL00835           95 AGCTGAAGATGAAGATTTGCGAAAAAGCGGAGATGCTTTTATGTCAAGAA    144

BSNT_04951       109 GTCCCGGGATTTTGGGAGTTTATTTTGTACATGGTAGATGAGAACTC--A    156
                     ||.||.||.||||||||||||||    .|||...|.|.||| ||.||  .
BL00835          145 GTGCCTGGTTTTTGGGAGTTTAT----AACAGAATTGCTGA-AAGTCCTT    189

BSNT_04951       157 TAA    159
                     |||
BL00835          190 TAA    192


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