Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01038 and BL00846
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:33
# Commandline: needle
# -asequence dna-align/BSNT_01038___moaC.1.5803.seq
# -bsequence dna-align/BL00846___moaC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01038___moaC-BL00846___moaC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01038___moaC-BL00846___moaC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01038___moaC
# 2: BL00846___moaC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 554
# Identity: 384/554 (69.3%)
# Similarity: 384/554 (69.3%)
# Gaps: 58/554 (10.5%)
# Score: 1335.0
#
#
#=======================================
BSNT_01038___ 1 GTGTATGATCTGTTTAAGGAGCGTTTTAATATGAATGGATTTTCTCATTT 50
|||||||..|||.|.|||||
BL00846___moa 1 ------------------------------ATGAATGAGTTTACACATTT 20
BSNT_01038___ 51 TAATGAACAGGGCAGAGCCCAGATGGTGGATATTAGCGAAA---AATCTT 97
|||||||||.|||||||||.|||||||.|||||.||||||| ||.|||
BL00846___moa 21 TAATGAACAAGGCAGAGCCAAGATGGTTGATATAAGCGAAAAGGAAGCTT 70
BSNT_01038___ 98 CGACTGTCCGTACTGCGGCGGCTGTTTCAAGCGTACACATGAAGAAT-GA 146
|.||.||.||.||.|||||||||||||||||...||| |||| ||
BL00846___moa 71 ---CAGTGCGCACAGCTGCGGCTGTTTCAAGCGTGTCCAT---GAATCGA 114
BSNT_01038___ 147 GGTGTAC--GAGAAAATACAGAGTCATGATATCGGCAAAGGAGATGTACT 194
|..|||| ||.|||||..|.|..|..||.|||||.|||||.|||||..|
BL00846___moa 115 GAAGTACATGAAAAAATCAAAAACCGCGAAATCGGAAAAGGCGATGTGTT 164
BSNT_01038___ 195 GGCTGTCGCACAGGTGGCAGGCATTATGGCCGCAAAGCAAACGTCGAATA 244
|||.||.||.||.|||||.||.||.|||||.|||||.||.||.||....|
BL00846___moa 165 GGCGGTGGCGCAAGTGGCCGGAATCATGGCTGCAAAACAGACATCCGCCA 214
BSNT_01038___ 245 TCATTCCGATGTGCCATCCGCTTTCATTGAGCGGGGTAGATATATCGTTT 294
||||.||||||||.||||||.|..|..|||..||.||.||.||..|.|||
BL00846___moa 215 TCATCCCGATGTGTCATCCGATCGCTCTGAAAGGAGTCGACATCGCCTTT 264
BSNT_01038___ 295 GACTGGAAAATAAAAGAAGCAGAAG-TTATACTTCATATAAAAGCACAGG 343
..||||.|.|..|||| |||||||| ..||.||.||||||.||.|..|.|
BL00846___moa 265 TGCTGGGAGAAGAAAG-AGCAGAAGAGCATCCTGCATATACAATCTAACG 313
BSNT_01038___ 344 TCAAAACGAAAGGGAGTACAGGTGTGGAAATGGAAGCGCTCACTTCTGCA 393
||||.||.||||||||.|||||||||||||||||||||.|.||.||.||.
BL00846___moa 314 TCAAGACCAAAGGGAGCACAGGTGTGGAAATGGAAGCGTTAACGTCGGCC 363
BSNT_01038___ 394 TCGGTGTGCGCTCTTACCGTTTACGATATGTGCAAGGCCCTTGATAAGGG 443
||.||.||.||.||.||||||||.||.||||||||.||....||||||||
BL00846___moa 364 TCCGTATGTGCGCTGACCGTTTATGACATGTGCAAAGCGGCGGATAAGGG 413
BSNT_01038___ 444 GATGGTCATCGGCCCTA-CTTTCTTGCTGGAGAAGACAGGCGGGAAAAAC 492
.|||||.||.||.||.| ||||||| ||.||.||||||||||||||||||
BL00846___moa 414 AATGGTGATAGGACCGACCTTTCTT-CTCGAAAAGACAGGCGGGAAAAAC 462
BSNT_01038___ 493 GGTGACTTTAAAAGAGAACTATCCGA-GTATA-ATTTGGAGGACCAAAAA 540
|||||||.||||||.|||..|.|.|| |||.| | |||||| |
BL00846___moa 463 GGTGACTATAAAAGGGAAAAAGCTGATGTAGACA--TGGAGG-------A 503
BSNT_01038___ 541 TGA- 543
|.|
BL00846___moa 504 TTAG 507
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