Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00121 and BL00852

See Amino acid alignment / Visit BSNT_00121 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:48
# Commandline: needle
#    -asequence dna-align/BSNT_00121___ftsH.1.5803.seq
#    -bsequence dna-align/BL00852___ftsH.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00121___ftsH-BL00852___ftsH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00121___ftsH-BL00852___ftsH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00121___ftsH
# 2: BL00852___ftsH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1938
# Identity:    1577/1938 (81.4%)
# Similarity:  1577/1938 (81.4%)
# Gaps:          42/1938 ( 2.2%)
# Score: 6388.5
# 
#
#=======================================

BSNT_00121___      1 ATGAATCGGGTCTTCCGTAATACCATTTTTTATTTACTTATTTTATTAGT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BL00852___fts      1 ATGAATCGGGTCTTCCGTAATACCATTTTTTATTTACTTATTTTATTAGT     50

BSNT_00121___     51 AGTAATCGGGGTTGTGAGCTACTTCCAGACCTCAAATCCGAAAACAGAAA    100
                     .||.|||||.|||||||||||||||||.|||.||||||||||||||||||
BL00852___fts     51 TGTGATCGGAGTTGTGAGCTACTTCCAAACCGCAAATCCGAAAACAGAAA    100

BSNT_00121___    101 ATATGTCGTACAGT-AC---GTTCATCAAAAACCTGGATGACGGGAAAGT    146
                     |||||.||||.||| ||   |||  ||  ||||||.||..|||||||.||
BL00852___fts    101 ATATGACGTATAGTGACTTTGTT--TC--AAACCTAGAAAACGGGAAGGT    146

BSNT_00121___    147 TGATAGCGTATCGGTTCAGCCTGTCAGAGGTGTTTATGAGGTAAAAGGGC    196
                     |||.|..||.||..|.|||||||||||.|||||.||.|||||....||||
BL00852___fts    147 TGAAAATGTCTCCATCCAGCCTGTCAGGGGTGTGTACGAGGTTCGGGGGC    196

BSNT_00121___    197 AGCTGAAAAACTACGACAAAGATCAATACTTTTTGACTCATGTTCCTGAA    246
                     ||||||..|.|||.||.||||||||.||.||..||||.||||||||||||
BL00852___fts    197 AGCTGACGACCTATGAAAAAGATCAGTATTTCCTGACCCATGTTCCTGAA    246

BSNT_00121___    247 GGAAAGGGAGCAGACCAGAT-ATT--TAACGCTTTGAAAAAGAC--AGAC    291
                     |||||.||.|||||.||.|| |||  |.|.|   |||||||.||  ||| 
BL00852___fts    247 GGAAAAGGGGCAGATCAAATCATTGATCAAG---TGAAAAAAACGAAGA-    292

BSNT_00121___    292 GTAAAGGTTGAGCCCGCTCAAGAAACAAGCGGATGGGTGACGTTCCTGAC    341
                      ||.|..|.||.||.||.||||||.|||..||||||.||||||||.|.||
BL00852___fts    293 -TACAAATAGAACCTGCGCAAGAAGCAAATGGATGGATGACGTTCTTTAC    341

BSNT_00121___    342 GACCATCATCCCATTTGTCATTATCTTTATTCTGTTTTTCTTCCTGCTCA    391
                     .|||||||||||.|||||.||||||||.|||||.||.|||||||||||.|
BL00852___fts    342 CACCATCATCCCTTTTGTTATTATCTTCATTCTTTTCTTCTTCCTGCTTA    391

BSNT_00121___    392 ATCAGGCTCAAGGTGGCGGCAGCCGTGTCATGAACTTTGGCAAGAGTAAA    441
                     |||||||||||||.||||||||||||||.|||||||||||.||.||.||.
BL00852___fts    392 ATCAGGCTCAAGGCGGCGGCAGCCGTGTTATGAACTTTGGAAAAAGCAAG    441

BSNT_00121___    442 GCGAAGCTGTATACAGAGGAAAAGAAACGCGTCAAATTTAAAGACGTTGC    491
                     ||||||||.||||||||.||||||||||||||||||||.|||||.||.||
BL00852___fts    442 GCGAAGCTCTATACAGAAGAAAAGAAACGCGTCAAATTCAAAGATGTGGC    491

BSNT_00121___    492 AGGGGCTGACGAAGAAAAGCAAGAACTTGTTGAAGTTGTTGAGTTTCTGA    541
                     |||.||.||.||||||||||||||.|||||.|||||.|||||.||.||.|
BL00852___fts    492 AGGAGCGGATGAAGAAAAGCAAGAGCTTGTGGAAGTCGTTGATTTCCTCA    541

BSNT_00121___    542 AAGATCCCCGCAAGTTTGCCGAGCTTGGCGCCAGAATACCGAAAGGCGTG    591
                     |.|||||||||||.|||||||||||.||.||.|||||.||||||||||||
BL00852___fts    542 AGGATCCCCGCAAATTTGCCGAGCTCGGTGCAAGAATTCCGAAAGGCGTG    591

BSNT_00121___    592 CTTTTAGTCGGACCTCCGGGTACCGGTAAAACATTGCTTGCCAAGGCTTG    641
                     |||||.||||||||||||||||||||||||||||||||.||.||.||.||
BL00852___fts    592 CTTTTGGTCGGACCTCCGGGTACCGGTAAAACATTGCTGGCGAAAGCATG    641

BSNT_00121___    642 TGCAGGTGAAGCCGGCGTACCTTTCTTCAGCATCAGCGGATCTGATTTCG    691
                     |||.||||||||.||.||.||||||||||||||||||||||||||.||||
BL00852___fts    642 TGCCGGTGAAGCAGGGGTGCCTTTCTTCAGCATCAGCGGATCTGACTTCG    691

BSNT_00121___    692 TTGAAATGTTTGTAGGGGTCGGTGCTTCCCGTGTGCGTGACTTGTTTGAA    741
                     ||||||||||.||.|||||.|||||.||.|||||.||.||||||||||||
BL00852___fts    692 TTGAAATGTTCGTCGGGGTTGGTGCATCACGTGTTCGCGACTTGTTTGAA    741

BSNT_00121___    742 AATGCAAAAAAGAATGCGCCTTGTTTGATTTTCATTGATGAAATTGATGC    791
                     ||.||.||.||.||||||||.|||.||||||||||.|||||.||||||||
BL00852___fts    742 AACGCCAAGAAAAATGCGCCGTGTCTGATTTTCATCGATGAGATTGATGC    791

BSNT_00121___    792 AGTCGGACGCCAGCGTGGTGCTGGTCTCGGCGGTGGACACGATGAACGTG    841
                     .||||||||||||||.||.||.||.||.|||||.||.|||||||||||||
BL00852___fts    792 TGTCGGACGCCAGCGGGGAGCAGGCCTTGGCGGAGGTCACGATGAACGTG    841

BSNT_00121___    842 AACAGACGCTAAACCAATTGCTTGTTGAAATGGACGGATTCAGCGCTAAT    891
                     ||||||||||.|||||..|.||||||||||||||||||||||||||.|||
BL00852___fts    842 AACAGACGCTCAACCAGCTTCTTGTTGAAATGGACGGATTCAGCGCCAAT    891

BSNT_00121___    892 GAAGGAATTATCATCATTGCTGCGACGAACCGTGCGGACATCTTGGACCC    941
                     ||||||||.||||||||.||||||||.|||||.||.||.||.||.|||||
BL00852___fts    892 GAAGGAATCATCATCATCGCTGCGACAAACCGCGCCGATATTTTAGACCC    941

BSNT_00121___    942 AGCCTTACTTCGTCCGGGACGTTTTGACCGTCAAATCACAGTGGACCGCC    991
                     .||.||.||.||.|||||||||||||||||||||||.||.||.|||||||
BL00852___fts    942 TGCATTGCTGCGCCCGGGACGTTTTGACCGTCAAATTACTGTTGACCGCC    991

BSNT_00121___    992 CAGATGTCATTGGCCGTGAAGCTGTATTGAAAGTCCATGCGAGAAACAAA   1041
                     |.|||||||..|||||||||||||||.|..||||.||.||.||||||||.
BL00852___fts    992 CGGATGTCAAAGGCCGTGAAGCTGTACTTCAAGTACACGCAAGAAACAAG   1041

BSNT_00121___   1042 CCGCTGGATGAAACGGTTAACCTAAAATCAATTGCCATGAGAACACCAGG   1091
                     ||.||.||||||.|.||.|||||||||.|.||.||.|||.|.||.|||||
BL00852___fts   1042 CCTCTTGATGAATCCGTAAACCTAAAAGCGATCGCGATGCGGACGCCAGG   1091

BSNT_00121___   1092 CTTCTCAGGCGCTGACTTAGAAAATCTCTTGAATGAAGCTGCGCTTGTAG   1141
                     .|||||.||.||.|||.|.|||||.||.||.||||||||.||.|||||.|
BL00852___fts   1092 GTTCTCGGGTGCAGACCTTGAAAACCTTTTAAATGAAGCGGCTCTTGTGG   1141

BSNT_00121___   1142 CAGCTCGTCAAAACAAGAAAAAAATCGATGCGCGTGATATTGACGAAGCG   1191
                     |.||.||||||.|.||||||||.||||||..|||.||.||.||.||||||
BL00852___fts   1142 CGGCGCGTCAAGATAAGAAAAAGATCGATATGCGAGACATCGATGAAGCG   1191

BSNT_00121___   1192 ACGGACCGTGTAATTGCCGGACCTGCTAAGAAGAGCCGCGTTATCTCCAA   1241
                     ||.|||||.||.||.|||||||||||.|||||.|||.|.||.|||||.||
BL00852___fts   1192 ACAGACCGCGTCATCGCCGGACCTGCAAAGAAAAGCAGGGTGATCTCGAA   1241

BSNT_00121___   1242 GAAAGAACGCAATATCGTGGCTTATCACGAAGGC-GGACACACCGTTATC   1290
                     .|||||||||||||||||||||||||||| |||| |||||||||||||||
BL00852___fts   1242 AAAAGAACGCAATATCGTGGCTTATCACG-AGGCGGGACACACCGTTATC   1290

BSNT_00121___   1291 GGACTCGTTTTAGATGAGGCAGATATGGTTCATAAAGTAACGATTGTTCC   1340
                     |||||.||.||.||||||||.||||||||.|||||||||||||||||.||
BL00852___fts   1291 GGACTTGTCTTGGATGAGGCGGATATGGTGCATAAAGTAACGATTGTACC   1340

BSNT_00121___   1341 TCGGGGCCAGGCTGGCGGTTATGCTGTTATGCTGCC-AAGAGAAGACCGT   1389
                     .||.|||||.||.|||||.|||||.||.|||||.|| ||| |||||||||
BL00852___fts   1341 GCGCGGCCAAGCAGGCGGATATGCCGTCATGCTTCCTAAG-GAAGACCGT   1389

BSNT_00121___   1390 TATTTCCAAACAAAGCCGGAACTGCTTGATAAAATTGTCGGCCT-CTTGG   1438
                     |||||||||||.||.||.|||||.||.|||||.|||||||||.| ||| |
BL00852___fts   1390 TATTTCCAAACCAAACCCGAACTTCTCGATAAGATTGTCGGCTTGCTT-G   1438

BSNT_00121___   1439 GCGGACGTGTTGCTGAAGAGATTATCTTCGGTGAAGTCAGCACAGGGGCG   1488
                     |.||.|||||.|||||.||.||.||||||||.||.||||||||.||.||.
BL00852___fts   1439 GAGGCCGTGTAGCTGAGGAAATCATCTTCGGCGAGGTCAGCACGGGCGCC   1488

BSNT_00121___   1489 CACAATGACTTCCAGCGTGCGACGAATATTGCAAGACGAATGGTTACGGA   1538
                     ||.||||||||||||||.||.||....|||||.|||||||||||.||.||
BL00852___fts   1489 CATAATGACTTCCAGCGCGCTACAGGCATTGCCAGACGAATGGTAACCGA   1538

BSNT_00121___   1539 ATTCGGTATGTCAGAAAAACTGGGACCGTTGCAATTTGGACAGTCTCAGG   1588
                     ||||||||||||.|||||.||.||.||..|.|||||.|||||.||.||.|
BL00852___fts   1539 ATTCGGTATGTCTGAAAAGCTCGGTCCTCTTCAATTCGGACAATCGCAAG   1588

BSNT_00121___   1589 GCGGTCAGGTATTCTTAGGCCGTGATTTCAACAACGAACAGAACTACAGT   1638
                     ||||.||.||||||||.||.||.|||||||||||.||.||.||||||||.
BL00852___fts   1589 GCGGGCAAGTATTCTTGGGTCGAGATTTCAACAATGACCAAAACTACAGC   1638

BSNT_00121___   1639 GATCAAATCGCTTACGAAATTGATCAGGAAATTCAGCGCATCATCAAAGA   1688
                     ||....||.||.||.|||||.|||.|.|||||.||||||.||||.||.||
BL00852___fts   1639 GACGCGATTGCGTATGAAATCGATAAAGAAATCCAGCGCTTCATTAAGGA   1688

BSNT_00121___   1689 ATGTTATGAGCGTGCGAAACAAATCCTGACTGAAAATCGTGACAAGCTTG   1738
                     |||||||||.|||||.|||..||||||.|||||||||||.|||||.||||
BL00852___fts   1689 ATGTTATGAACGTGCAAAAACAATCCTTACTGAAAATCGCGACAAACTTG   1738

BSNT_00121___   1739 AATTGATTGCCCAAACGCTTCTGAAAGTTGAAACGCTTGACGCTGAACAG   1788
                     |..||||.||.|||||..|.|||.|||||||||||||.||||||||.||.
BL00852___fts   1739 AGCTGATCGCTCAAACATTGCTGGAAGTTGAAACGCTCGACGCTGAGCAA   1788

BSNT_00121___   1789 ATCAAACACCTTATC-GATCATGGAACATTACCTGAGCGTAATTTCTCAG   1837
                     |||||.|| .||.|| ||.||.||||.|.|.|||||.||.|..|.|||.|
BL00852___fts   1789 ATCAAGCA-TTTGTCTGAGCACGGAAGACTTCCTGATCGAACATACTCTG   1837

BSNT_00121___   1838 ATGAT---GAAAAGAACGATGATGTGAAAGTAAACATTCTGACAA-AAAC   1883
                     |||||   ||.||||..||||||||||||||.|||||     ||| ||||
BL00852___fts   1838 ATGATCAGGAGAAGACAGATGATGTGAAAGTCAACAT-----CAATAAAC   1882

BSNT_00121___   1884 -------AGAAGAAAAGAAAGACGATACGAAGGAGTAA   1914
                            .|||||.||.||.||.|||...||.||||||
BL00852___fts   1883 GAGATGACGAAGAGAAAAACGAGGATGAAAAAGAGTAA   1920


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