Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00123 and BL00853

See Amino acid alignment / Visit BSNT_00123 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:48
# Commandline: needle
#    -asequence dna-align/BSNT_00123___yacB.1.5803.seq
#    -bsequence dna-align/BL00853___yacB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00123___yacB-BL00853___yacB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00123___yacB-BL00853___yacB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00123___yacB
# 2: BL00853___yacB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 781
# Identity:     567/781 (72.6%)
# Similarity:   567/781 (72.6%)
# Gaps:          26/781 ( 3.3%)
# Score: 2060.0
# 
#
#=======================================

BSNT_00123___      1 ------------------GTGGGGAACACCAATACTGTACTTGGTGTATA     32
                                       ||.||.||.||.||.||.||.|||||..|.||
BL00853___yac      1 ATGTTGCTTGTTATAGATGTAGGAAATACAAACACCGTCCTTGGCATCTA     50

BSNT_00123___     33 TCATGATGGAAAATTAGAATATCACTGGCGTATAGAAACAAGCAGGCATA     82
                     .||.||.|||.|..|.||||||||.|||||.||.||.||||||.|.||||
BL00853___yac     51 CCACGAAGGAGAGCTTGAATATCATTGGCGGATTGAGACAAGCCGCCATA    100

BSNT_00123___     83 AAACAGAAGATGAGTTTGGGATGATTTTGCGCTCCTTATTTGATCACTCC    132
                     ||||.|||||.||.||.||.|||.||.|.||.||.|||||||||.|...|
BL00853___yac    101 AAACGGAAGACGAATTCGGCATGCTTCTTCGTTCTTTATTTGATTATGTC    150

BSNT_00123___    133 GGGCTTATGTTTGAACAGATAGATGGCATTATTATTTCGTCAGTAGTGCC    182
                     ||.||.||||||||.|||||.||.||.|||||||||||.|||||.||.||
BL00853___yac    151 GGACTGATGTTTGACCAGATCGAGGGGATTATTATTTCATCAGTTGTACC    200

BSNT_00123___    183 GCCAATCATGTTTGCGTTAGAAAGAATGTGCACAAAATACTTTCATATCG    232
                     .||.||||||||..|..|.|||||||||||.|..|||||.|||||.||||
BL00853___yac    201 ACCGATCATGTTCTCCCTCGAAAGAATGTGTATCAAATATTTTCAGATCG    250

BSNT_00123___    233 AGCCTCAAATTGTTGGTCCAGGTATGAAAACCGGTTTAAATATAAAATAT    282
                     |||||||.|||||.|||||.||.||||||||.||.|||||.||||||||.
BL00853___yac    251 AGCCTCAGATTGTCGGTCCGGGAATGAAAACAGGATTAAACATAAAATAC    300

BSNT_00123___    283 GACAATCCGAAAGAAGTGGGGGCAGACAGAATCGTAAATGCTGTCGCTGC    332
                     ||.||||||||||||||.||.||||||.|.||.|||||.||.||.||.||
BL00853___yac    301 GATAATCCGAAAGAAGTCGGAGCAGACCGCATTGTAAACGCAGTAGCCGC    350

BSNT_00123___    333 GATACACTTGTACGGCAATCCATTAATTGTTGTCGATTTCGGAACCGCCA    382
                     .||.||..|.||.||||..||.||.|||||.||.|||||.||||||||.|
BL00853___yac    351 TATTCATCTCTATGGCAGCCCCTTGATTGTCGTTGATTTTGGAACCGCTA    400

BSNT_00123___    383 CAACGTACTGCTATATTGATGAAAACAAACAATACATGGGCGGGGCGATT    432
                     |.||||||||.||.|||.||||...|||..||||.|||||.||.|||||.
BL00853___yac    401 CGACGTACTGTTACATTAATGAGCGCAAGGAATATATGGGTGGTGCGATC    450

BSNT_00123___    433 GCCCCTGGGATTACAATTTCGACAGAGGCGCTTTACTCGCGTGCAGCAAA    482
                     ||.||.||.||.||.|||||.||.||.||||||||.||..|.||.||.||
BL00853___yac    451 GCGCCGGGCATCACGATTTCAACTGAAGCGCTTTATTCAAGAGCTGCCAA    500

BSNT_00123___    483 GCTTCCGCGTATCGAAATCACCCGGCCCGACAATATTATCGGAAAAAACA    532
                     ||||||..|.||.|||||..|.|||||.||..||||..||||.||||..|
BL00853___yac    501 GCTTCCCAGAATTGAAATTGCACGGCCTGATCATATAGTCGGCAAAAGTA    550

BSNT_00123___    533 CTGTTAGCGCGATGCAATCTGGGATTTTATTTGGCTATGTCGGCCAAGTG    582
                     |.||.|||||||||||.||.||.|||.|.|..|||||||||||.||.||.
BL00853___yac    551 CGGTCAGCGCGATGCAGTCCGGAATTCTTTACGGCTATGTCGGACAGGTT    600

BSNT_00123___    583 GAAGGAATCGTTAAGCGAATGAAATGGCAGGC----AAAACAGGAACCAA    628
                     |||||.||.||.||.||.||||||||||||.|    ||||    |.||.|
BL00853___yac    601 GAAGGCATTGTCAAACGGATGAAATGGCAGTCCAAGAAAA----ATCCGA    646

BSNT_00123___    629 AGGTCATTGCGACAGGAGGCCTGGCGCCGCTCATTGCGAACGAATCAGAT    678
                     |.|||||.|||||.||.|||||.||..|..|.|||||..|||||||.||.
BL00853___yac    647 AAGTCATAGCGACGGGCGGCCTTGCTTCCTTGATTGCAGACGAATCGGAC    696

BSNT_00123___    679 TGTATAGACATCGTTGATCCATTCTTAACCCTAAAAGGGCTGGAATTGAT    728
                     ||.||.||.||.|||||.||.|||.|.||..|.||.|||||.||..|.||
BL00853___yac    697 TGCATCGATATTGTTGACCCGTTCCTTACGTTGAAGGGGCTAGAGCTCAT    746

BSNT_00123___    729 TTATGAAAGAAACCGCGTAGGAAGTGTATAG    759
                     |||||||.|.||.||.||.|.||||||||||
BL00853___yac    747 TTATGAACGGAATCGTGTTGAAAGTGTATAG    777


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_00123 and BL00853

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
