Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00135 and BL00862
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:49
# Commandline: needle
# -asequence dna-align/BSNT_00135___folB.1.5803.seq
# -bsequence dna-align/BL00862___folB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00135___folB-BL00862___folB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00135___folB-BL00862___folB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00135___folB
# 2: BL00862___folB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 389
# Identity: 272/389 (69.9%)
# Similarity: 272/389 (69.9%)
# Gaps: 31/389 ( 8.0%)
# Score: 954.0
#
#
#=======================================
BSNT_00135___ 1 ---------------------ATGGATAAAGTTTATGTAGAAGGTATGGA 29
||.||||||||..|||||||.||.|||||
BL00862___fol 1 TTGATAAAGGAGGCGTTTATCATCGATAAAGTGCATGTAGAGGGCATGGA 50
BSNT_00135___ 30 GTTTTACGGATATCACGGTGTGTTCAAAGAAGAAAACAAACTTGGCCAGC 79
|||||||||||||||||||||.||||||||||||||||||||.||||||.
BL00862___fol 51 GTTTTACGGATATCACGGTGTTTTCAAAGAAGAAAACAAACTCGGCCAGA 100
BSNT_00135___ 80 GGTTTAAAGTCGATTTAACCGCTGAGCTGGATTTAAGCAAAGCTGGACAA 129
|.||....||.|||.|.||.||....||.|||||||||.||||.||..||
BL00862___fol 101 GATTCCGCGTTGATCTGACAGCATTTCTAGATTTAAGCGAAGCCGGGAAA 150
BSNT_00135___ 130 ACAGACGACCTTGAGCAAACGATCAACTATGCTGAGCTCTATCATGTATG 179
||.||..|..|||||...||.||.||.|||||.|||||.|||.|..|.||
BL00862___fol 151 ACGGATAATATTGAGGCCACCATTAATTATGCAGAGCTGTATAAGCTGTG 200
BSNT_00135___ 180 TAAAGATATCGTGGAAGGGGAGCCTGTAAAATTGGTAGAAACGCTGGCGG 229
.|||||..|.|||||.||.|||||.||.||..|.||.||.||.||.||||
BL00862___fol 201 CAAAGAGGTTGTGGAGGGAGAGCCGGTCAACCTTGTGGAGACCCTCGCGG 250
BSNT_00135___ 230 -AACGTATTGCTGGCAC-TGTTCTCGAAAAATTTCAGCCTGTTCAGCAAT 277
|||| ||||| .|||| .||.||.||.||.|||.|..|.||||||.|||
BL00862___fol 251 AAACG-ATTGC-CGCACAAGTGCTGGAGAATTTTGAAGCGGTTCAGGAAT 298
BSNT_00135___ 278 GTACGGTGAAAGTGATTAAGCCAGACCCGCCAATTCCCGGACACTATAAA 327
|||||||.|||||..|.|||||.||.||.||.||.||.||.|||||||||
BL00862___fol 299 GTACGGTTAAAGTCGTCAAGCCTGATCCTCCTATACCTGGGCACTATAAA 348
BSNT_00135___ 328 TCAGTAGCAATTGAAATTACGAGAAA---AAAGTCATGA 363
||.||.||.||.||.||.|||||||| ||| ||||
BL00862___fol 349 TCGGTGGCCATCGAGATGACGAGAAAGCGAAA---ATGA 384
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