Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01275 and BL00911

See Amino acid alignment / Visit BSNT_01275 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:47
# Commandline: needle
#    -asequence dna-align/BSNT_01275___citT.1.5803.seq
#    -bsequence dna-align/BL00911___citT.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01275___citT-BL00911___citT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01275___citT-BL00911___citT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01275___citT
# 2: BL00911___citT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 696
# Identity:     535/696 (76.9%)
# Similarity:   535/696 (76.9%)
# Gaps:          30/696 ( 4.3%)
# Score: 2069.5
# 
#
#=======================================

BSNT_01275___      1 TTGATTCACATCGCGATTGCGGAGGATGATTTTCGAGTTGCGCAAATCCA     50
                     ||||||.|.||||.|||.||||||||||||||.||.||.||||||||.||
BL00911___cit      1 TTGATTGATATCGTGATCGCGGAGGATGATTTCCGTGTAGCGCAAATTCA     50

BSNT_01275___     51 TGAGAGATTGATTAAACAGCTTGATGGATTCAAGATTATCGGCAAGGCGG    100
                     |||.||||||||..|||||||||||||||||||.||||||||.||.||||
BL00911___cit     51 TGAAAGATTGATCGAACAGCTTGATGGATTCAACATTATCGGTAAAGCGG    100

BSNT_01275___    101 CTAACGCAAAAGAGACATTGGCGCTTTTGAAGGAACACAAGGTTGATTTG    150
                     |.||.||.|||||.|||.|||...||.|..|||..|..||||..||.|||
BL00911___cit    101 CCAATGCCAAAGAAACAATGGAAATTCTCGAGGTCCGAAAGGCCGACTTG    150

BSNT_01275___    151 CTTCTGCTGGATATTTATATGCCGGACGAGCTTGGGACCGCGTTGATTCC    200
                     ||.|||.||||||||||.||||||||.|||.|.||.||..|.||||||||
BL00911___cit    151 CTGCTGTTGGATATTTACATGCCGGATGAGATGGGCACAACATTGATTCC    200

BSNT_01275___    201 TGATATACGAAGCCGATTTCCTGAAGTGGACATTATGATTATCACAGCGG    250
                     ||..||.||||..||.|||||.||||||||.||.|||||.||||||||.|
BL00911___cit    201 TGTCATTCGAAAACGGTTTCCGGAAGTGGATATCATGATCATCACAGCAG    250

BSNT_01275___    251 CAACAGAAACCCGGCATTTGCAGGAAGCGCTAAGAGCAGGAATTGCCCAC    300
                     ||||.|||||..|.|||||.||||||.||||..|.||.|||||||..|||
BL00911___cit    251 CAACCGAAACATGTCATTTACAGGAATCGCTCCGGGCGGGAATTGTGCAC    300

BSNT_01275___    301 TATTTGATCAAACCCGTAACGGCTGACAAGTTCAGGCAGGTGCTGCTTCA    350
                     ||||||||.||.||.||.||.||.||.||.||||..||||||||||||||
BL00911___cit    301 TATTTGATTAAGCCTGTGACTGCCGAAAAATTCAAACAGGTGCTGCTTCA    350

BSNT_01275___    351 GTATAAAGAAAAAAGG---AAGCTGCTCATGTCTCAGCCGGAGGTCAGCC    397
                     .|||||..||||||||   |..||||   |.||||||||..|||||||||
BL00911___cit    351 ATATAAGAAAAAAAGGCAAACACTGC---TTTCTCAGCCACAGGTCAGCC    397

BSNT_01275___    398 AATCCATGATCGACCATATTTTTGGGAACAGTGTGAAGACAGCT------    441
                     ||||.|||||.|||||.||.||.||           ||||..||      
BL00911___cit    398 AATCAATGATTGACCAAATCTTCGG-----------AGACTTCTCCAGCG    436

BSNT_01275___    442 -TTGCC----GGCAGAGGATTTGCCGACTGGCATTAATTCGATTACACTG    486
                      .|.||    |||.||||||||||||||.||.||.|||||||||||||||
BL00911___cit    437 GATCCCGTCAGGCTGAGGATTTGCCGACAGGTATCAATTCGATTACACTG    486

BSNT_01275___    487 CGAAAAATTAAGGAAGCGCTTC-AGACTGCGTCAGAAGGATTGACAGCGG    535
                     |.||||||.|.|||.|..||.| |||| ||..|..|||||.|||||||.|
BL00911___cit    487 CAAAAAATCAGGGATGTTCTGCGAGAC-GCAGCTAAAGGAATGACAGCCG    535

BSNT_01275___    536 AGGAACTTGGGGAAAAAATGGGGGCGTCACGAACAACTGCCCGCCGTTAT    585
                     |.|||||.||.||||||||||||||.|||||.|||||.||||||||.|||
BL00911___cit    536 AAGAACTCGGTGAAAAAATGGGGGCTTCACGTACAACAGCCCGCCGCTAT    585

BSNT_01275___    586 GCCGAGTATCTTGTGTCAAAGGAAGAAGCAAGAGCCGAGCTTGAATACGG    635
                     |||||.|||||.||||||||.||||||||..|.||.|||||.||||||||
BL00911___cit    586 GCCGAATATCTCGTGTCAAAAGAAGAAGCGCGCGCTGAGCTGGAATACGG    635

BSNT_01275___    636 GATTATCGGCAGGCCGGAGAGAAAATATTATTTGGCGGCGGATTAG    681
                     .|||||||||||.||||||||||||||.||||||||||..||.||.
BL00911___cit    636 AATTATCGGCAGACCGGAGAGAAAATACTATTTGGCGGATGAATAA    681


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