Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03506 and BL00921
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:29
# Commandline: needle
# -asequence dna-align/BSNT_03506___mleN.1.5803.seq
# -bsequence dna-align/BL00921___mleN.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03506___mleN-BL00921___mleN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03506___mleN-BL00921___mleN.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03506___mleN
# 2: BL00921___mleN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1434
# Identity: 1033/1434 (72.0%)
# Similarity: 1033/1434 (72.0%)
# Gaps: 63/1434 ( 4.4%)
# Score: 3575.0
#
#
#=======================================
BSNT_03506___ 1 TTGAAGGATGTAAGATTGCCAACACTATTTGAAATTATTATTGTACTAGG 50
|||||....|.|.|.||||||.||.|.||.|||||.|||..||||.||||
BL00921___mle 1 TTGAAAACAGCACGGTTGCCATCAATGTTGGAAATCATTTGTGTATTAGG 50
BSNT_03506___ 51 AGTATTTTTAGCACTTGTTCTATCGTTTACAGTCTTTCTCGACTTGCCGA 100
.|.|||||||||..|.|||...||.|||||||||....||||..||||||
BL00921___mle 51 TGCATTTTTAGCGATAGTTTGTTCATTTACAGTCAAATTCGAGCTGCCGA 100
BSNT_03506___ 101 TACAGCTGGCGCTTTTTGTTTCATGGTTTATTGCAATGCTTTTAGGTATA 150
|.||||||||..|.|||.||||||||||..|.| ||.||||
BL00921___mle 101 TTCAGCTGGCATTGTTTATTTCATGGTTCTTGG---TGATTTT------- 140
BSNT_03506___ 151 AGACTCGGTTATT----CT----------TATAAAGATTTACAAAATGCG 186
.||||| |.| || |||.|||||||.|||||..||
BL00921___mle 141 --GCTCGG--ACTGCGCCTGGGGCACCGGTATGAAGATTTGCAAAAATCG 186
BSNT_03506___ 187 ATTGTACATGGAATATCAAATGGCCTTGAAGCCGTACTGATTCTCGTTTC 236
|||..|.|.|||||.||||||||.||||||||..||.||||.||..||.|
BL00921___mle 187 ATTACAAACGGAATTTCAAATGGACTTGAAGCGATATTGATCCTGATTGC 236
BSNT_03506___ 237 AGTTGGGGCGCTCATCGGAACATGGATTGCCGGAGGCGTTGTGCCGACTT 286
.||.||.||.||.|||||.||||||||.|||||.||.|||||||||||||
BL00921___mle 237 CGTCGGCGCTCTTATCGGCACATGGATAGCCGGCGGTGTTGTGCCGACTT 286
BSNT_03506___ 287 TGATTTATTACGGACTGGAATTTATTCACCCAAGTATCTTTTTACTGGCA 336
|||||||||||||.||.||.|||||.|||||.||.||.||..|.||.||.
BL00921___mle 287 TGATTTATTACGGGCTTGAGTTTATCCACCCGAGCATATTCCTGCTTGCC 336
BSNT_03506___ 337 ACGTTAATTATTTGTTCCATTATGTCTGTGGCAACAGGAACGTCATGGGG 386
|||.|.|||||||||||.||.|..|||||.||.|||||.|||||.|||||
BL00921___mle 337 ACGCTCATTATTTGTTCGATCACATCTGTTGCCACAGGTACGTCTTGGGG 386
BSNT_03506___ 387 AACAGTCGGAACTGCCGGCATTGCCATGATCGCAATTGGAG-AGGGTTTA 435
.||.||.|||||.|||||.||.||||||||.|||||.||.| ||||.|..
BL00921___mle 387 GACTGTAGGAACGGCCGGGATCGCCATGATGGCAATCGGGGAAGGGCTGG 436
BSNT_03506___ 436 GGCATTCCGCTTCCTCTAGTAGCGGGAGCTATTCTTTCAGGTGCTTATTT 485
||| ||||||||||.||.|||||.|||||..|.||.||.||.||.||.||
BL00921___mle 437 GGC-TTCCGCTTCCGCTTGTAGCCGGAGCCGTGCTGTCCGGAGCCTACTT 485
BSNT_03506___ 486 CGGGGACAAGCTGTCTCCGCTGTCTGACAGTACAGTTCTAGCTTCTTCAC 535
.||.||.||..|.||.|||||.||.||.|||||.||.||.||.||.||.|
BL00921___mle 486 TGGAGATAAATTATCGCCGCTTTCCGATAGTACGGTGCTTGCGTCATCCC 535
BSNT_03506___ 536 TATCAAAAGTCGATGT-ATTGGCTCACGTGAGAGCAATGCTTTATTTATC 584
|.|||||.|||||.|| ||| .|.||.||.|||||.|||||.||.||.||
BL00921___mle 536 TTTCAAAGGTCGAAGTGATT-ACCCATGTCAGAGCGATGCTGTACTTGTC 584
BSNT_03506___ 585 AATACCTGCTTATGTCATTACAGCTATACTCTTTACAGTTGTTGGATTTA 634
.||.||.||.|||.|.||.||.||..|.||.||.||..|....||.||||
BL00921___mle 585 GATTCCCGCCTATTTAATCACGGCGGTCCTGTTCACCATCACCGGCTTTA 634
BSNT_03506___ 635 TGTACGGCGGGAA----AAATATTGATCTTGATAAAGTTGAATTCTTAAA 680
|||| .|||| ||||.|||||.|.||.|||||||||||.||.||
BL00921___mle 635 TGTA----TGGAAGCCGAAATGTTGATTTGGAAAAAGTTGAATTTTTGAA 680
BSNT_03506___ 681 ATCATCTTTGCAAAACACGTTTGACATTCATATTTGGATGCTGATCCCGG 730
|.|.||||||||.|||||||||||.|||||.|||||||||||..|.||||
BL00921___mle 681 AGCTTCTTTGCAGAACACGTTTGATATTCACATTTGGATGCTTGTTCCGG 730
BSNT_03506___ 731 CAGTTGTCGTCATAGTCTTATTGGCGATGAAAAAGCCATCTATGCCGGTT 780
|.|||||||||||.||..||||||||||||.||||||||||.|||||...
BL00921___mle 731 CTGTTGTCGTCATCGTTCTATTGGCGATGAGAAAGCCATCTGTGCCGACG 780
BSNT_03506___ 781 ATCGTAATTGGCG--CTTTACTCGGTGCAATCTGGGCTGTTGTTTTCCAA 828
||||..||.|||| |||| |.||.||.||||||||||..||.||||||
BL00921___mle 781 ATCGCGATCGGCGCACTTT--TGGGCGCGATCTGGGCTGCGGTCTTCCAA 828
BSNT_03506___ 829 GGAATGGATATTGCCCATGCGATTGCAACTGCTTACAACGGTTTCTCTAT 878
||.|||||..||||..|||||||.|..||.||.||||||||.||.||.||
BL00921___mle 829 GGCATGGACTTTGCGGATGCGATCGGCACAGCATACAACGGCTTTTCCAT 878
BSNT_03506___ 879 TAAAACTGATGTTGAATTTTTGAACG-GCTTGTTAAACCGCGGTGGAATT 927
|.|.||.|...|..|||||.||.||| || |.|||||.|||||.|||||.
BL00921___mle 879 TGACACCGGGATCAAATTTATGGACGAGC-TCTTAAATCGCGGAGGAATA 927
BSNT_03506___ 928 GTCGGTATGCTTGATTCTCTCGTCGTCATCATCTTTGGCCTTGGTTTTGG 977
|..||.|||||.|.|||..|||||||||||||..|.||.||.||.|||||
BL00921___mle 928 GAGGGCATGCTCGGTTCGGTCGTCGTCATCATTCTCGGTCTGGGCTTTGG 977
BSNT_03506___ 978 CGGTCTGCTT-GAGAAACTCGGCGTGTTAAAAGTCATTGTTTCAACGTTT 1026
|||.|| ||| |||.|..|.|||||..|||||||.||.||.||.|.|||.
BL00921___mle 978 CGGCCT-CTTGGAGCACTTAGGCGTTCTAAAAGTGATCGTCTCCAAGTTC 1026
BSNT_03506___ 1027 GAAAAGAAATTAACTTCAGCCGGCAATGTCACATTGTCTACACTGATCGT 1076
.|..|.||..|.|||||.||||||||.||||||||.||.||..|.|||||
BL00921___mle 1027 CAGCAAAAGCTGACTTCTGCCGGCAACGTCACATTCTCGACGATTATCGT 1076
BSNT_03506___ 1077 AGCGTTTTTAGCGAACATCTTCGGCTGTGCGATGTATGTATCTCTTATTT 1126
.||.||.||.||.||..|.||||||||.|||||||||||.||.||.||||
BL00921___mle 1077 CGCCTTCTTGGCAAATGTGTTCGGCTGCGCGATGTATGTCTCGCTCATTT 1126
BSNT_03506___ 1127 TGACTCCGAAAATTATGGAAGACAGCTATGATC--GCTTGCATCTGGACA 1174
|.||.|||||||||||||||.|.|||||||| | |||.|.| .|.|||.
BL00921___mle 1127 TAACACCGAAAATTATGGAAAAAAGCTATGA-CAAGCTCGGA-ATTGACC 1174
BSNT_03506___ 1175 GAAGAGTGTTATCACGTAACTCAGAGGTCGGGGGAACATTGACTTCGGGG 1224
|.||.|||.|.||..|.|||.|.||.|||||.||.||..||||.|||||.
BL00921___mle 1175 GGAGGGTGCTGTCCAGAAACGCGGAAGTCGGCGGTACGATGACGTCGGGC 1224
BSNT_03506___ 1225 ATGGTACCTTGGTCTGATAATGGGATTTACATGGCTGGTATTTTAGGTGT 1274
|||||.||.|||||.||.||.||.||.||.|||||.||.|||.|.||.||
BL00921___mle 1225 ATGGTGCCGTGGTCGGACAACGGCATATATATGGCGGGGATTCTCGGCGT 1274
BSNT_03506___ 1275 TTCTACCTTCTCTTATCTGCCGTTTATGTGGCTCAGTTTTGTAGCAATAG 1324
.||.||||||||||||.|||||||.||||||||.||.|||||..||||.|
BL00921___mle 1275 CTCGACCTTCTCTTATGTGCCGTTCATGTGGCTGAGCTTTGTTTCAATCG 1324
BSNT_03506___ 1325 GTCTTGCAATTATCTATGGTTATACAGGAAAATTTATATGGTATA-CGAA 1373
|.|||||.|||.|.||.||.||.|||||.||||||||.|||||.| |||.
BL00921___mle 1325 GCCTTGCGATTTTGTACGGATACACAGGTAAATTTATTTGGTACACCGAT 1374
BSNT_03506___ 1374 AAACAATACAGTTAAAGCCGAAAAACTAGGCTAA 1407
|||.||.|| ..||||....|.|||
BL00921___mle 1375 AAAAAAGAC-----TCGCCGGTTCAGTAG----- 1398
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