Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04398 and BL00956

See Amino acid alignment / Visit BSNT_04398 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:34
# Commandline: needle
#    -asequence dna-align/BSNT_04398___bioB.1.5803.seq
#    -bsequence dna-align/BL00956___bioB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04398___bioB-BL00956___bioB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04398___bioB-BL00956___bioB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04398___bioB
# 2: BL00956___bioB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1018
# Identity:     786/1018 (77.2%)
# Similarity:   786/1018 (77.2%)
# Gaps:          26/1018 ( 2.6%)
# Score: 3071.0
# 
#
#=======================================

BSNT_04398___      1 ATGAATCAATGGATGGAACTCGCAGACCGGGTGCTGGCTGGAGCAGAAGT     50
                     ||||||||.|||||||||||.|||||.||.|||||||.|||.|..|||||
BL00956___bio      1 ATGAATCAGTGGATGGAACTTGCAGAACGTGTGCTGGATGGCGGGGAAGT     50

BSNT_04398___     51 GACTGACGAAGAGGCGCTTTCAATATTACATTGTCCTGATGAAGATATTT    100
                     .|||||..|||||||||||||.||.||..|.||.||.|||||.||..||.
BL00956___bio     51 AACTGAAAAAGAGGCGCTTTCCATCTTGGAATGCCCGGATGACGACGTTC    100

BSNT_04398___    101 TGCTATTAATGCATGGAGCTTTTCATATCAGAAAACACTTTTATGGAAAA    150
                     |.||..|.|||||||..||||||||.||||||||||.||..||.||||||
BL00956___bio    101 TTCTGCTTATGCATGCCGCTTTTCAAATCAGAAAACGCTACTACGGAAAA    150

BSNT_04398___    151 AAAGTAAAGCTCAATATGATTATGAATGCGAAATCCGGGCTCTGCCCGGA    200
                     |||||||||||||||||||||||||||||.||||||||.||.||.|||||
BL00956___bio    151 AAAGTAAAGCTCAATATGATTATGAATGCAAAATCCGGCCTTTGTCCGGA    200

BSNT_04398___    201 AAACTGCGGCTATTGTTCACAGTCTGCGATTTCGAAAGCGCCGATTGAGT    250
                     ||||||||||||.||.||.||||||.||||.||.|||||||||||.||..
BL00956___bio    201 AAACTGCGGCTACTGCTCGCAGTCTTCGATATCAAAAGCGCCGATCGACA    250

BSNT_04398___    251 CTTATCGGATGGTGAATAAGGAAACG---CTGCTTGAAGGCGCGAAGCGG    297
                     ..||.||||||||..|.|   |||||   .|||||||||||||.|||||.
BL00956___bio    251 GCTACCGGATGGTCGACA---AAACGACCTTGCTTGAAGGCGCAAAGCGT    297

BSNT_04398___    298 GCGCACGATCTGAATATCGGCACATATTGTATCGTGGCAAGCGGCAGAGG    347
                     |||||||||.|.||||||||.|||||.||.||||||||.|||||||||||
BL00956___bio    298 GCGCACGATTTAAATATCGGAACATACTGCATCGTGGCGAGCGGCAGAGG    347

BSNT_04398___    348 GCCGTCTAACAGAGAAGTGGATCAGGTCGTAGATGCGGTTCAGGAAATTA    397
                     .|||||.|||||||||||.|||||.||.||.||.||.|||.|.|||||.|
BL00956___bio    348 ACCGTCCAACAGAGAAGTCGATCAAGTGGTCGACGCCGTTAAAGAAATCA    397

BSNT_04398___    398 AAGAGACGTATGGACTGAAGGTTTGTGCGTGTCTCGGACTGTTGAAGCCA    447
                     ||||.|||||.||..|.||..|.||.||.||.|||||||||.|.|||||.
BL00956___bio    398 AAGAAACGTACGGTTTAAAAATCTGCGCATGCCTCGGACTGCTAAAGCCC    447

BSNT_04398___    448 GAGCAGGCGAAGCGGCTCAAAGATGCCGGAGTAGACCGCTATAATCATAA    497
                     |.|||.||..|||||||.||.||.||||||||||||||.||.|||||.||
BL00956___bio    448 GGGCAAGCCGAGCGGCTGAAGGAAGCCGGAGTAGACCGGTACAATCACAA    497

BSNT_04398___    498 TTTGAATACGTCACAGAGGAACCATTCAAACATCACGACCTCACATACAT    547
                     ..|.|||||.|||.|.|..|||||||||||.||.||.||.||.||.||.|
BL00956___bio    498 CATCAATACATCAAAAACCAACCATTCAAATATTACAACGTCCCACACGT    547

BSNT_04398___    548 ACGATGACAGAGTCAATACGGTTGAAATCGCAAAAGAATCGGGGCTGTCT    597
                     |.||||||||.||.||.||.||.||||..||.|||.||||.|||.||||.
BL00956___bio    548 ATGATGACAGGGTGAACACTGTGGAAACAGCCAAAAAATCCGGGATGTCC    597

BSNT_04398___    598 CCGTGTTCAGGCGCCATTATCGGGATTAAGGAGACGAAACAGGATGTCAT    647
                     ||.|||||.||||.|||..|||||||.||.||||||||.|||||||||.|
BL00956___bio    598 CCATGTTCGGGCGTCATCGTCGGGATGAAAGAGACGAAGCAGGATGTCGT    647

BSNT_04398___    648 TGACATCGCCAAAAGCTTGAAGGCCCTTGACGCGGATTCCATTCCTGTGA    697
                     |||.||.||.||||||||.|||||.||.||.||.||.||.|||||.||.|
BL00956___bio    648 TGATATGGCGAAAAGCTTAAAGGCGCTGGATGCCGACTCGATTCCAGTTA    697

BSNT_04398___    698 ATTTTTTGCATGCAATTGATGGCACGCCGTTAGAAGGCGTCAACGAATTA    747
                     |||||||||||||.||.||.||.||.|||.|.|||||.|||||.|||||.
BL00956___bio    698 ATTTTTTGCATGCGATCGACGGGACTCCGCTGGAAGGGGTCAATGAATTG    747

BSNT_04398___    748 AACCCGCTGTATTGTTTAAAAGTGCTGGCGCTGTTCCGTTTTATCAATCC    797
                     ||.|||||.|||||||||||.||..|.||..|||||||.||||||||.||
BL00956___bio    748 AATCCGCTTTATTGTTTAAAGGTTTTAGCTTTGTTCCGCTTTATCAACCC    797

BSNT_04398___    798 ATCAAAAGAAATTCGCATTTCCGGAGGAAGAGAGGTCAATCTCCGCTCAT    847
                     ..||||.|||||.||||||||.||.||..|.||.|||||.||||||||.|
BL00956___bio    798 GACAAAGGAAATCCGCATTTCAGGGGGGCGCGAAGTCAACCTCCGCTCCT    847

BSNT_04398___    848 TGCAGCCATTAGGGCTTTACGCCGCAAACTCCATTTTTGTCGGAGACTAC    897
                     |||||||.||.|||||.||.|||||.||.||.||.||.|||||||||||.
BL00956___bio    848 TGCAGCCGTTGGGGCTGTATGCCGCCAATTCAATCTTCGTCGGAGACTAT    897

BSNT_04398___    898 TTAACAACTGCCGGGCAAGAGGAGACGGAGGATCATAAAATGCTGAGTGA    947
                     |||||.||.||.||.||..|.||.||.|||||.|||||.|||||...|||
BL00956___bio    898 TTAACGACGGCAGGACAGAATGAAACAGAGGACCATAAGATGCTTCATGA    947

BSNT_04398___    948 TTTAGGCTTTGAAGTTGAATCAGTCGAAGAAATGAAGGCCAGTTTA----    993
                     ||||||.||.|||||.|||||.||||||||||||||.|||||||||    
BL00956___bio    948 TTTAGGGTTCGAAGTCGAATCGGTCGAAGAAATGAAAGCCAGTTTACAGC    997

BSNT_04398___    994 ---AGTGCGAAAAGCTGA   1008
                        ||             
BL00956___bio    998 GGTAG-------------   1002


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