Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01259 and BL00958
See
Amino acid alignment /
Visit
BSNT_01259 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:46
# Commandline: needle
# -asequence dna-align/BSNT_01259___yfmP.1.5803.seq
# -bsequence dna-align/BL00958___ymfP.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01259___yfmP-BL00958___ymfP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01259___yfmP-BL00958___ymfP.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01259___yfmP
# 2: BL00958___ymfP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 434
# Identity: 312/434 (71.9%)
# Similarity: 312/434 (71.9%)
# Gaps: 22/434 ( 5.1%)
# Score: 1092.0
#
#
#=======================================
BSNT_01259___ 1 TTGGAATGGATGAAGATTGATCAAGTGGCCAAAAGAAGCGGGCTGACAAA 50
.||||.||||||||||||||||||.|||||||..|||||||.|||||.||
BL00958___ymf 1 GTGGAGTGGATGAAGATTGATCAAATGGCCAAGCGAAGCGGCCTGACGAA 50
BSNT_01259___ 51 GCGGACCATCCGGTTTTATGAAGAAATCGGCTTGATTCCGGCGCCGAAAC 100
..|.||.|||||.|||||.|||||||||||..||.||.|..|.|||||.|
BL00958___ymf 51 AAGAACGATCCGCTTTTACGAAGAAATCGGTCTGCTTTCTTCACCGAAGC 100
BSNT_01259___ 101 GGACAGACGGCGGTGTAAGGCTTTATTCAGAGGATGATATGGAGGAGCTT 150
||||.||.|||||.||..|.|||||.||.||.||.|||.|.|||||.|||
BL00958___ymf 101 GGACGGAAGGCGGAGTCCGTCTTTACTCTGAAGACGATCTTGAGGAACTT 150
BSNT_01259___ 151 GAGAAAGTCATCAGCACAAAAGAGGTGCTCGGTTTTTCCCTTCAGGAGCT 200
||.|.|||.||||||.|.||.||.|||||.||.||.||.||.||||||||
BL00958___ymf 151 GAAAGAGTGATCAGCGCGAAGGAAGTGCTGGGATTCTCGCTGCAGGAGCT 200
BSNT_01259___ 201 TCAGCATTTCATGGAAACCAGCCGCCAGCTAGAGTTAAACAAAGAGGGGT 250
.|||||.|||||||||||..||...||.||.|||.|.||.|||||.||.|
BL00958___ymf 201 CCAGCAGTTCATGGAAACGGGCAAGCACCTGGAGATGAATAAAGAAGGAT 250
BSNT_01259___ 251 ATTTGTTGTCACTGGATCCTAA---GGAACGGAAAGAAAAACTGGAGGAA 297
|..|.|||||.||||| ||| ||||||.||||||||.||.||.||.
BL00958___ymf 251 ACCTATTGTCGCTGGA---TAAACGGGAACGAAAAGAAAAGCTTGAAGAC 297
BSNT_01259___ 298 ATTCAGGAAACCCTGAATCACCAGCTGAGTTTGATTGATGA-------GA 340
||||||...|..||||||.|.|||.||||..|||||||||| ||
BL00958___ymf 298 ATTCAGAGGATGCTGAATGAACAGATGAGAATGATTGATGAAAAGATTGA 347
BSNT_01259___ 341 AAATCCGCACATTCCAAAGCTTTAAAGAA-CGCCTGCAAGGCATGAAAGG 389
||| |||.| ||.|.||.||||| |||.||.||||.|||.|.|.
BL00958___ymf 348 AAA-------ATTTC-AATCATTCAAGAAGCGCTTGGAAGGTATGCAGGC 389
BSNT_01259___ 390 TAAAGCGGAACGCGCCATTCAATCAATCGAATGA 423
.|||||.||....|||.|.||||||||.||.|.|
BL00958___ymf 390 AAAAGCCGAGAATGCCCTACAATCAATTGATTAA 423
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.