Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01264 and BL00963
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:46
# Commandline: needle
# -asequence dna-align/BSNT_01264___yfmM.1.5803.seq
# -bsequence dna-align/BL00963___yfmM.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01264___yfmM-BL00963___yfmM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01264___yfmM-BL00963___yfmM.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01264___yfmM
# 2: BL00963___yfmM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1571
# Identity: 1257/1571 (80.0%)
# Similarity: 1257/1571 (80.0%)
# Gaps: 28/1571 ( 1.8%)
# Score: 5022.5
#
#
#=======================================
BSNT_01264___ 1 ATGAGTATT--TTATCTGT---AAAGGATTTAAGCCACGGCTTCGGGGAC 45
|||||| || ||| |.|| |||| .|.||||||||.||.||.|||
BL00963___yfm 1 ATGAGT-TTACTTA-CAGTTACAAAG---CTGAGCCACGGTTTTGGCGAC 45
BSNT_01264___ 46 CGGGCCATTTTTAATAACGTTTCCTTCCGCCTGTTAAAAGGCGAGCACGT 95
|||||.||.|||.||.|..|.|||||.|||.||.|.||||||||.||.||
BL00963___yfm 46 CGGGCGATCTTTCATGATATATCCTTTCGCTTGCTGAAAGGCGAACATGT 95
BSNT_01264___ 96 CGGCTTGATCGGCGCAAACGGTGAAGGAAAATCAACCTTCATGAATATTA 145
|||..|.|||||.||||||||.|||||||||||.||||||||||||||.|
BL00963___yfm 96 CGGTCTCATCGGAGCAAACGGCGAAGGAAAATCGACCTTCATGAATATCA 145
BSNT_01264___ 146 TTACCGGAAAGCTTGAACCTGATGAGGGAAAAGTCGAATGGTCAAAAAAT 195
||||.||.||.|||||.|||||.||.||||||||.||||||||||||||.
BL00963___yfm 146 TTACGGGCAAACTTGAGCCTGACGAAGGAAAAGTAGAATGGTCAAAAAAC 195
BSNT_01264___ 196 GTCCGTGTCGGCTATCTGGATCAGCATACCGTGCTGGAAAAAGGAAAATC 245
|||||.|||||||||||.||.||||||||...|||.||....|||.||.|
BL00963___yfm 196 GTCCGGGTCGGCTATCTTGACCAGCATACATCGCTTGAGCGCGGACAAAC 245
BSNT_01264___ 246 TATTCGCGACGTCCTGAAAGACGCGTTCCATTATCTATTTGCGATGGAAG 295
.||.|||||.||.||||.|.||||.|||||||||.|||||||||||||||
BL00963___yfm 246 GATCCGCGATGTGCTGAGAAACGCTTTCCATTATTTATTTGCGATGGAAG 295
BSNT_01264___ 296 AGGAAATGAACGAGATTTACAACAAAATGGGTGAAGCAGATCCCGACGAG 345
|.|||.||||.|..||.||||..||||||||.||.||.||.|||||||||
BL00963___yfm 296 AAGAAGTGAATGCCATCTACACAAAAATGGGCGAGGCCGACCCCGACGAG 345
BSNT_01264___ 346 CTCGAAAAGCTGCTTGAAGAAGTCGG--CGTCATTCAAGACGCGCTGACA 393
||.||||||||.||.||||||||||| || |||||.|||||.|||||.
BL00963___yfm 346 CTTGAAAAGCTTCTCGAAGAAGTCGGAACG--ATTCAGGACGCCCTGACC 393
BSNT_01264___ 394 AACAATGATTTTTATGTCATTGATTCCAAGGTGGAAGAAATCGCCCGCGG 443
|||||.||.|||||.|..|||||..|.||.||.|||||||||||||||||
BL00963___yfm 394 AACAACGACTTTTACGCGATTGACGCAAAAGTTGAAGAAATCGCCCGCGG 443
BSNT_01264___ 444 TCTCGGTTTGAGCGATATCGGATTAGAGCGAGATGTCACCGATTTGAGCG 493
.|||||..|.|.||||.|||||.|.||..|.||||||.|.||.|||||||
BL00963___yfm 444 CCTCGGGCTCAACGATCTCGGACTTGACAGGGATGTCGCGGAATTGAGCG 493
BSNT_01264___ 494 GCGGACAGCGCACAAAGGTCCTTCTCGCTAAGCTGCTCCTTGAAAAGCCG 543
||||.|||||.||||||||.||.|||||.||.||||||.|.||||||||.
BL00963___yfm 494 GCGGTCAGCGGACAAAGGTGCTGCTCGCCAAACTGCTCTTGGAAAAGCCC 543
BSNT_01264___ 544 GAAATTCTGCTTCTCGATGAGCCGACCAACTATCTTGATGAACAGCATAT 593
||.||.|||||.||||||||||||||.||||||||.||.|||||||||||
BL00963___yfm 544 GACATCCTGCTGCTCGATGAGCCGACAAACTATCTGGACGAACAGCATAT 593
BSNT_01264___ 594 TGAATGGCTGAAACGCTACCTGCAGGAATACGAGAACGCGTTCATCCTGA 643
.|||||||||||||||||..|||||||.|||||||||||.||.||..|||
BL00963___yfm 594 CGAATGGCTGAAACGCTATTTGCAGGAGTACGAGAACGCCTTTATTTTGA 643
BSNT_01264___ 644 TTTCCCACGATATTCCGTTCTTGAATAGTGTCATCAACCTGATTTATCAC 693
||||.|||||.||||||||.||.||.||.||||||||.|||||.||.||.
BL00963___yfm 644 TTTCTCACGACATTCCGTTTTTAAACAGCGTCATCAATCTGATCTACCAT 693
BSNT_01264___ 694 GTTGAAAATCAAGAGCTGACACGCTATGTCGGCGACTACCATCAGTTTAT 743
||.|||||.||.||||||||.||||||||||||||||||.|.||.||...
BL00963___yfm 694 GTGGAAAACCAGGAGCTGACCCGCTATGTCGGCGACTACAACCAATTCCG 743
BSNT_01264___ 744 GGAAGTCTACGAGGTGAAGAAACAGCAGCTTGAAGCGGCCTATAAAAAGC 793
.|||||.||.||.|||||.|||||.|||||||||||.|||||.|||||.|
BL00963___yfm 744 CGAAGTATATGAAGTGAAAAAACAACAGCTTGAAGCCGCCTACAAAAAAC 793
BSNT_01264___ 794 AGCAGCAGGAAGTCGCAGAGCTGAAGGATTTCGTCGCCCGCAACAAAGCG 843
||||||||||..|..||||||||||.||.|||||||||||||||||||||
BL00963___yfm 794 AGCAGCAGGAGATTTCAGAGCTGAAAGACTTCGTCGCCCGCAACAAAGCG 843
BSNT_01264___ 844 CGCGTCAGCACGAGAAACATGGCGATGTCCCGCCAAAAGAAACTCGATAA 893
|||||||||||.|||||.|||||.|||||.||.|||||.||.||||||||
BL00963___yfm 844 CGCGTCAGCACAAGAAATATGGCAATGTCACGGCAAAAAAAGCTCGATAA 893
BSNT_01264___ 894 GATGGATATGATCGAGCTTGCGGCAGAAAAGCCAAAGCCGGAATTCCACT 943
.|||||||||||||||||..|..|.|||||.||.|||||.|||||.||||
BL00963___yfm 894 AATGGATATGATCGAGCTCCCTTCGGAAAAACCGAAGCCTGAATTTCACT 943
BSNT_01264___ 944 TTAAGCCGGCGAGAACGTCAGGCAAGCTGATTTTTGAAACAAAGGATCTC 993
||||.|..||.|||||.||.||.|||||||||||||||||.|||||.|||
BL00963___yfm 944 TTAAACAAGCAAGAACATCCGGAAAGCTGATTTTTGAAACGAAGGAGCTC 993
BSNT_01264___ 994 GTGATCGGTTACGATTCCCCGCTGTCCCGTCCGCTCAACCTCCGCATGGA 1043
||.|||||.||.|||...|||.|||||||.|||||.|||.|..|.|||||
BL00963___yfm 994 GTCATCGGCTATGATGAGCCGTTGTCCCGCCCGCTGAACTTGAGAATGGA 1043
BSNT_01264___ 1044 GCGCGGCCAAAAAATCGCCCTTTACGGCGCAAACGGGATCGGAAAAACGA 1093
||||||||||||||||||.||.|||||.||.|||||.||.||||||||||
BL00963___yfm 1044 GCGCGGCCAAAAAATCGCTCTGTACGGAGCCAACGGCATTGGAAAAACGA 1093
BSNT_01264___ 1094 CGTTGCTGAAAAGTTTGCTTGGTGAAA-TCCAGCCGCT------CGAAGG 1136
|.|||||||||||..|.||.||.|||| |.|| ||||| .|||
BL00963___yfm 1094 CATTGCTGAAAAGCCTCCTGGGGGAAATTTCA-CCGCTGTCGGGAGAA-- 1140
BSNT_01264___ 1137 CTCTGTAGAACGCGGTGAGCACATCTATACCGGCTATTTCGAGCAAGAGG 1186
||.||||||||.||.|||.|..|||.|||||||||||||||.||.|
BL00963___yfm 1141 ----GTCGAACGCGGCGAACACCTTCATATCGGCTATTTCGAGCAGGAAG 1186
BSNT_01264___ 1187 TCAAGGAAACAAACAACAATACGTGCATCGAAGAAGTATGGAGCGAATTC 1236
||||.||.||.||||||||.||.|||||.||||||||.||||.|||.|||
BL00963___yfm 1187 TCAAAGAGACCAACAACAACACATGCATAGAAGAAGTGTGGAACGACTTC 1236
BSNT_01264___ 1237 CCTTCTTATACGCAGTATGAAATCCGTGCCGCTTTGGCAAAATGCGGACT 1286
||.||.|.|||.|||||.||||||||.||.||..||||.||.|||||.||
BL00963___yfm 1237 CCGTCCTTTACACAGTACGAAATCCGCGCGGCCCTGGCGAAGTGCGGGCT 1286
BSNT_01264___ 1287 GACGACAAAGCATATCGAAAGCCGCGTCGCCGTATTAAGCGGAGGCGAAA 1336
||||||||||||||||||||||.|.||..||||||||||||||||.||||
BL00963___yfm 1287 GACGACAAAGCATATCGAAAGCAGGGTTTCCGTATTAAGCGGAGGGGAAA 1336
BSNT_01264___ 1337 AAGCGAAAGTCAGATTGTGCAAGCTAATCAACTCAGAAACAAACCTGCTG 1386
||||.|||||||||.|.||||||||.|||||.||||||||.||.|||||.
BL00963___yfm 1337 AAGCAAAAGTCAGACTATGCAAGCTTATCAATTCAGAAACGAATCTGCTT 1386
BSNT_01264___ 1387 GTGCTCGATGAGCCGACAAACCACTTGGATGTCGATGCCAAGGAAGAGCT 1436
||.||||||||.||||||||||||.|.|||||.||.||.||.|||||..|
BL00963___yfm 1387 GTACTCGATGAACCGACAAACCACCTTGATGTTGAAGCAAAAGAAGAATT 1436
BSNT_01264___ 1437 CAAGCGCGCCCTGAAAGAATATAAAGGCTCCATTCTGCTCATTTCCCACG 1486
.||..|.||..||||||||||.||||||||..|.||||||||.||.||||
BL00963___yfm 1437 AAAAAGAGCTTTGAAAGAATACAAAGGCTCTGTCCTGCTCATCTCTCACG 1486
BSNT_01264___ 1487 AGCCAGACTTTTATATGGATATCGCGACAGAAACGTGGAACTGCGAGTCT 1536
|.||.||.||.||||||||.||.|||||||||||.|||||.||||||||.
BL00963___yfm 1487 AACCTGAATTCTATATGGACATAGCGACAGAAACATGGAATTGCGAGTCA 1536
BSNT_01264___ 1537 TGGACGACGAAAGTGCTTTAA 1557
|||||.||||||||..|.|||
BL00963___yfm 1537 TGGACAACGAAAGTTTTATAA 1557
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