Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00263 and BL01015
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:57
# Commandline: needle
# -asequence dna-align/BSNT_00263___ybaL.1.5803.seq
# -bsequence dna-align/BL01015___mrp.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00263___ybaL-BL01015___mrp.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00263___ybaL-BL01015___mrp.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00263___ybaL
# 2: BL01015___mrp
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1088
# Identity: 799/1088 (73.4%)
# Similarity: 799/1088 (73.4%)
# Gaps: 55/1088 ( 5.1%)
# Score: 2860.5
#
#
#=======================================
BSNT_00263___ 1 ATGATAAGAGAAGATGAAGTAAGAAAACTAGTCGGAGAAATGCGCGAACC 50
|||.|..|||||||.||.||||.|||..|||||||.||..||..|||.||
BL01015___mrp 1 ATGTTGCGAGAAGACGATGTAAAAAAGATAGTCGGCGATTTGGACGAGCC 50
BSNT_00263___ 51 TTTTCTTCA-AAGACCTCTGGGAGAATTGGATGCCGTTAAGGAAATTAAA 99
.|||||||| ||| ||.||..||||..||||||||||.||.|||||||||
BL01015___mrp 51 ATTTCTTCACAAG-CCGCTCAGAGAGCTGGATGCCGTAAAAGAAATTAAA 99
BSNT_00263___ 100 ATAAAGCCTGAAAAACGGCATATCAGTGTAAAAGTCGCTCTTGCAAAAAC 149
|||||.||.|||||||||||..||||.|||||.||.||.||.||||||||
BL01015___mrp 100 ATAAAACCCGAAAAACGGCACGTCAGCGTAAAGGTGGCGCTCGCAAAAAC 149
BSNT_00263___ 150 AGGAACTGCAGAACAAATGCAGATTCAGCAAGAGATCGT-AAACGTATTA 198
.|||.||||.||||||||||||.|||||||.||.||||| |.||| .||.
BL01015___mrp 150 GGGATCTGCCGAACAAATGCAGCTTCAGCAGGAAATCGTCATACG-GTTG 198
BSNT_00263___ 199 AAAGGGGCAGGAGCTGAGACAGTCGGCCTTCGATTTGAAGAGCTGCCTGA 248
||||..||.||.||.|||||.||||||||.||.|||||.||||||||.||
BL01015___mrp 199 AAAGAAGCCGGTGCAGAGACGGTCGGCCTGCGTTTTGAGGAGCTGCCCGA 248
BSNT_00263___ 249 AGAAACGGT------------------TGCTAAATTCCGGGCGCCGTCAG 280
||||...|| |||.||| ||||
BL01015___mrp 249 AGAAGTCGTAATGAGTTATCAAGAGTCTGCCAAA----GGGC-------- 286
BSNT_00263___ 281 CTGAGAAAAAAACATTATTAAATATGGATAACCCGCCAGTCTTTCTTGCC 330
||.|..||.|..|..|.||||..||.||.|.|||.||.|||.|.||.
BL01015___mrp 287 ---AGGATCAATCTCTGCTGAATAGTGAAAAACAGCCTGTGTTTTTAGCT 333
BSNT_00263___ 331 GTAGCAAGTGGAAAAGGCGGCGTAGGCAAGTCAACTGTGTCCGTAAACCT 380
||.|||||.||.|||||||||||.||||||||.||.|||||.||.||..|
BL01015___mrp 334 GTGGCAAGCGGCAAAGGCGGCGTCGGCAAGTCGACGGTGTCGGTCAATTT 383
BSNT_00263___ 381 AGCTATTTCTCTGGCTCGTCTAGGGAAAAAGGTTGGTTTAATTGATGCGG 430
.|||.|.||.|||||.||..|.||.||.||.||.||.|||||.||.||.|
BL01015___mrp 384 GGCTGTGTCCCTGGCGCGAATCGGAAAGAAAGTCGGATTAATCGACGCCG 433
BSNT_00263___ 431 ATATTTATGGGTTCAGTGTGCCGGACATGATGGGTATCACTGTGCGTCCA 480
|||||||.||.||||||||.|||||.||||||||.||||||||.||.||.
BL01015___mrp 434 ATATTTACGGTTTCAGTGTTCCGGATATGATGGGAATCACTGTACGGCCG 483
BSNT_00263___ 481 ACGATTGAAGGAGAGAAACTTC-TTCCTGTTGAACGCTTTGGAGTAAAGG 529
|||||.|||||||| |||..|| |.||.||||||.|.||.||.||.||.|
BL01015___mrp 484 ACGATCGAAGGAGA-AAAGGTCGTGCCGGTTGAAAGATTCGGGGTCAAAG 532
BSNT_00263___ 530 TCATGTCAATGGGCTTTTTCGTAGAAGAAAATGCTCCGGTCGTATGGAGA 579
|.||.||.|||||.||.||.||||||||.|||||.||.|||.|.||||||
BL01015___mrp 533 TGATTTCGATGGGATTCTTTGTAGAAGACAATGCCCCTGTCATTTGGAGA 582
BSNT_00263___ 580 GGACCGATGCTCGGCAAAATGCTGAATAACTTTTTCCATGAAGTAGAGTG 629
||.||.|||||.||.|||||||||||||||||.||||||||.||.||.||
BL01015___mrp 583 GGCCCCATGCTTGGAAAAATGCTGAATAACTTCTTCCATGAGGTTGAATG 632
BSNT_00263___ 630 GGGAGAAGTAGACTATATCGT-TCTT-GATCTTCCGCCTGGTACAGGGGA 677
|||.||.||.||.||||| | |||| ||.||.|||||.||.|||||.||
BL01015___mrp 633 GGGGGATGTCGATTATAT--TATCTTAGACCTGCCGCCGGGAACAGGCGA 680
BSNT_00263___ 678 TGTTGCTCTCGATGTACATACAATGCTTCCGAGCTGCAAAGAAATCATCG 727
|||.||.||.|||||.||..||||||||||.|||||||||||..|.||||
BL01015___mrp 681 TGTAGCGCTTGATGTTCACTCAATGCTTCCAAGCTGCAAAGAGGTGATCG 730
BSNT_00263___ 728 TATCTACGCCGCATCCGACAGCTGCTTTTGTCGCGGCCAGAGCGGGCTCT 777
|.||.||||||||.||.||.||.||.||||||||.||.|||||||||.|.
BL01015___mrp 731 TGTCGACGCCGCACCCTACTGCCGCGTTTGTCGCTGCAAGAGCGGGCGCG 780
BSNT_00263___ 778 ATGGCGATTAAAACCGATCATGAGGTCGTGGGGGTCATAGAGAACATGGC 827
|||||..|.||.|||||||||||..||||||||.||.|.||.||.|||||
BL01015___mrp 781 ATGGCCTTGAAGACCGATCATGAAATCGTGGGGATCGTTGAAAATATGGC 830
BSNT_00263___ 828 TTATTATGAAAGTG-CAAAGACAGGGGAAAGAGAATATGTCTTTGGAAAA 876
||||||.|||||.| |||| |||||.||.|.|||||||||.||.||.|||
BL01015___mrp 831 TTATTACGAAAGCGTCAAA-ACAGGCGAGAAAGAATATGTATTCGGCAAA 879
BSNT_00263___ 877 GGCGGAGGAGATAAACTGGCTGAGGAACTAAATGTGCCTTTGCTCGGCAG 926
||||||||.||.||.||.||.|||||||||...||.||..|.||.||||.
BL01015___mrp 880 GGCGGAGGCGAAAAGCTCGCAGAGGAACTAGGCGTTCCAATTCTGGGCAA 929
BSNT_00263___ 927 AATCCCATTGAAACAGCCAGATTGGGATAAGGACCAATTTGCTCCGTCTG 976
|||.||..||||.|||||.|||||||||.|...|.|||||||.|||||.|
BL01015___mrp 930 AATTCCGCTGAAGCAGCCGGATTGGGATGACAGCGAATTTGCGCCGTCCG 979
BSNT_00263___ 977 TTTACGACGAGAATCATCCAATCGGAGAAATATATCAGGACATCGCAAAA 1026
||||.||.||.|..||.||.|.|||.|..||.|||..|||.|||||.|||
BL01015___mrp 980 TTTATGATGAAAGCCACCCGACCGGCGCCATTTATTTGGATATCGCCAAA 1029
BSNT_00263___ 1027 AAAATAGATGCAAAAATGTCTGTGC-----AGGTATAA 1059
|||||.||.|.||..|| || || ||.| |||
BL01015___mrp 1030 AAAATCGACGAAAGCAT---TG-GCGCAAAAGCT-TAA 1062
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