Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00262 and BL01016

See Amino acid alignment / Visit BSNT_00262 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:57
# Commandline: needle
#    -asequence dna-align/BSNT_00262___cwlD.1.5803.seq
#    -bsequence dna-align/BL01016___cwlD.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00262___cwlD-BL01016___cwlD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00262___cwlD-BL01016___cwlD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00262___cwlD
# 2: BL01016___cwlD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 727
# Identity:     520/727 (71.5%)
# Similarity:   520/727 (71.5%)
# Gaps:          26/727 ( 3.6%)
# Score: 1711.0
# 
#
#=======================================

BSNT_00262___      1 ATGAGGAAAAAGCTTAAATGGCTCAGTTTTTTGCTAGGCTTCATCATATT     50
                     ||||.||||||..|.|||||||||.|.|||||.||.|||||..||.|.||
BL01016___cwl      1 ATGAAGAAAAAAATAAAATGGCTCGGGTTTTTACTCGGCTTTGTCGTTTT     50

BSNT_00262___     51 ACTA--TTTCTGTTCAAGTATCAGTTCAGCAATAACGACTCTTGGAAGCC     98
                     |.||  |||.| ||||| |||||.||||.||||.|.||.||||||..|.|
BL01016___cwl     51 ATTATGTTTAT-TTCAA-TATCAATTCAACAATGATGATTCTTGGCGGTC     98

BSNT_00262___     99 GTGGAGCCTGCCCTTGAGCGGTAAAATCATTTATCTAGATCCAGGTCATG    148
                     .||||..||.||..|||||||.||||||||||||.|.|||||.||.||.|
BL01016___cwl     99 ATGGAATCTTCCGCTGAGCGGCAAAATCATTTATATTGATCCTGGACACG    148

BSNT_00262___    149 GCGGGC-CTGACGGCGGAGCAGTC-GGCGGAAAGCTGTTAGAGAAGGATG    196
                     | |||| |.||.||.||.||| || .||||..|.||..|.||.||.||.|
BL01016___cwl    149 G-GGGCGCCGATGGAGGGGCA-TCAAGCGGTGAACTCCTTGAAAAAGACG    196

BSNT_00262___    197 TTACCCTGGAAGTGGCCTTTAGAGTCAGGGATTATCTTCAAGAACAAGGA    246
                     |..|.||.|||||..||.|.|||.|||||||.|||||.||.||.||.||.
BL01016___cwl    197 TGGCTCTTGAAGTATCCCTAAGAATCAGGGACTATCTCCAGGAGCAGGGC    246

BSNT_00262___    247 GCGCTT-GTTATCATGACCAGAGAAAGTGATACTGATCTCGCTCCAGAAG    295
                     || ||| ||.||..||||..|.||....|||..||||||||||||.||||
BL01016___cwl    247 GC-CTTGGTGATGCTGACGCGGGAGGACGATCATGATCTCGCTCCTGAAG    295

BSNT_00262___    296 GAACAAAAGG-CTATAGCCGACGAAAAGCTGAGGATCT-----AAGACAA    339
                     .|||.|..|| || .|||.||.||||||||||.|| ||     ||||   
BL01016___cwl    296 AAACGAGGGGACT-CAGCAGAAGAAAAGCTGAAGA-CTTGCGGAAGA---    340

BSNT_00262___    340 CGAGTCAAATTAATAAACCATTCAGAGGCGGAGCTCTATATCAGCATTCA    389
                      |.|||.|..|.||.|||.||||.||.||.||.||.||..|||||||.||
BL01016___cwl    341 -GGGTCGATATGATCAACAATTCTGAAGCCGATCTTTACCTCAGCATCCA    389

BSNT_00262___    390 TCTTAATGCGATTCCGTCACAAAAATGGAGCGGCGCCCAAAGCTTTTATT    439
                     |.|.|||||||||||.||......|||||||||.||.||||||||.||||
BL01016___cwl    390 TTTGAATGCGATTCCTTCCGCGCGATGGAGCGGTGCGCAAAGCTTCTATT    439

BSNT_00262___    440 ACGGGAAATATGCGGAAAATGAGAAAGTCGCAAAATACATTCAGGATGAG    489
                     |||||.||||||..||.|||||....|.|||.||.|..|||||||||||.
BL01016___cwl    440 ACGGGCAATATGAAGAGAATGAACGGGCCGCCAAGTTTATTCAGGATGAA    489

BSNT_00262___    490 CTGAGAAGAAATCTGGAAAACACAACCCGGAAAGCAAAGCGGATTCATGG    539
                     .|.|||...|||||.||||||||.||.|||||.|||||||||||.||.||
BL01016___cwl    490 TTAAGACATAATCTTGAAAACACGACGCGGAAGGCAAAGCGGATACACGG    539

BSNT_00262___    540 TATCTACTTAATGCAAAACGTCACCAAACCGGGGGCGCTTATAGAAGTCG    589
                     .||.||.||.||||||||.||.|..||.||.|||||.|||.|.|||.|||
BL01016___cwl    540 AATTTATTTGATGCAAAATGTTAAAAAGCCCGGGGCCCTTGTCGAAATCG    589

BSNT_00262___    590 GGTTTTTATCCAATCC--AAGTGAAGCAACGTTGCTCGGTAAACCGAAAT    637
                     |||||||.||.||.||  ||  ||.||||....|||.|..||.||.||||
BL01016___cwl    590 GGTTTTTGTCTAACCCGGAA--GAGGCAAAACAGCTGGCCAAGCCCAAAT    637

BSNT_00262___    638 ATCAAGACAAGGTGGCATCTTCCATATATAAAGGCATTTTGCGATATTTC    687
                     ||||.|||||..|.|||.|.|||.|.|||||||||.|.|||||.||.||.
BL01016___cwl    638 ATCAGGACAAAATCGCAGCATCCGTTTATAAAGGCGTATTGCGCTACTTT    687

BSNT_00262___    688 ACAGAAAAAGGAGACCCTCCGGAGTAA    714
                     ||||||.|..||||||||||.||.|||
BL01016___cwl    688 ACAGAAGACAGAGACCCTCCTGAATAA    714


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