Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00254 and BL01019
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:57
# Commandline: needle
# -asequence dna-align/BSNT_00254___rplM.1.5803.seq
# -bsequence dna-align/BL01019___rplM.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00254___rplM-BL01019___rplM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00254___rplM-BL01019___rplM.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00254___rplM
# 2: BL01019___rplM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 438
# Identity: 423/438 (96.6%)
# Similarity: 423/438 (96.6%)
# Gaps: 0/438 ( 0.0%)
# Score: 2055.0
#
#
#=======================================
BSNT_00254___ 1 ATGCGTACAACACCTATGGCTAACGCAAGTACTATTGAACGCAAGTGGTT 50
|||||||||||||||||||||||||||||||.||||||||||||||||||
BL01019___rpl 1 ATGCGTACAACACCTATGGCTAACGCAAGTAATATTGAACGCAAGTGGTT 50
BSNT_00254___ 51 AGTTGTTGATGCTGCTGGCAAGACTTTAGGTCGTCTTTCTTCAGAAGTTG 100
||||||||||||||||||||||||..||||.|||||||||.|.|||||||
BL01019___rpl 51 AGTTGTTGATGCTGCTGGCAAGACGCTAGGACGTCTTTCTACTGAAGTTG 100
BSNT_00254___ 101 CAGCTATCCTTCGCGGAAAACACAAACCAACTTACACACCACACGTTGAT 150
||.|||||||||||||||||||.||||||||||||||||||||||||||.
BL01019___rpl 101 CATCTATCCTTCGCGGAAAACATAAACCAACTTACACACCACACGTTGAC 150
BSNT_00254___ 151 ACTGGAGATCATGTGATCATCATCAACGCTGAAAAAATCGAGTTAACTGG 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BL01019___rpl 151 ACTGGAGATCATGTGATCATCATCAACGCTGAAAAAATCGAGTTAACTGG 200
BSNT_00254___ 201 TAAAAAGTTAACTGACAAAATCTACTACCGTCACACTCAACATCCAGGCG 250
||||||||||||.|||||||||||||||||||||||||||||||||||||
BL01019___rpl 201 TAAAAAGTTAACGGACAAAATCTACTACCGTCACACTCAACATCCAGGCG 250
BSNT_00254___ 251 GATTAAAATCAAGAACTGCTCTTGAAATGCGTACAAACTACCCTGAGAAA 300
|.||||||||||||||||||||||||||||||||||||||||||||||||
BL01019___rpl 251 GTTTAAAATCAAGAACTGCTCTTGAAATGCGTACAAACTACCCTGAGAAA 300
BSNT_00254___ 301 ATGCTTGAGCTTGCTATCAAAGGCATGCTTCCAAAAGGTTCTCTAGGTCG 350
||||||||.|||||.|||||||||||||||||||||||||||||||||||
BL01019___rpl 301 ATGCTTGAACTTGCGATCAAAGGCATGCTTCCAAAAGGTTCTCTAGGTCG 350
BSNT_00254___ 351 TCAAATGTTCAAAAAATTGAACGTATACCGTGGTTCTGAGCATCCACACG 400
|||||||||||||||||||||.|||||||||||||||||||||||||||.
BL01019___rpl 351 TCAAATGTTCAAAAAATTGAATGTATACCGTGGTTCTGAGCATCCACACC 400
BSNT_00254___ 401 AAGCACAAAAACCTGAAGTTTACGAACTTCGCGGTTAA 438
||||||||||||||||||||||||||||||||||||||
BL01019___rpl 401 AAGCACAAAAACCTGAAGTTTACGAACTTCGCGGTTAA 438
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