Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00251 and BL01022

See Amino acid alignment / Visit BSNT_00251 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:56
# Commandline: needle
#    -asequence dna-align/BSNT_00251___ybaE.1.5803.seq
#    -bsequence dna-align/BL01022___cbiO.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00251___ybaE-BL01022___cbiO.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00251___ybaE-BL01022___cbiO.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00251___ybaE
# 2: BL01022___cbiO
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 889
# Identity:     630/889 (70.9%)
# Similarity:   630/889 (70.9%)
# Gaps:          77/889 ( 8.7%)
# Score: 2251.0
# 
#
#=======================================

BSNT_00251___      1 ---------------------------------------ATGAAGACGCC     11
                                                            |||||.|||||
BL01022___cbi      1 ATGGACATTGAAATCAAAGATGTAGAGCACCGATACCAGATGAAAACGCC     50

BSNT_00251___     12 GTTTGAGCGCCTAGCACTGTATGATATCAATGCATCGATTAAAGAAGGAA     61
                     .|||||.|||||.||..|.||||||.||||.||...||||||||||||||
BL01022___cbi     51 TTTTGAACGCCTGGCGATCTATGATGTCAACGCTGTGATTAAAGAAGGAA    100

BSNT_00251___     62 GCTACGTAGCCGTTATCGGGCATACAGGCTCTGGCAAGTCCACTCTTCTT    111
                     ||||.||.|||||.|||||.||||||||.||.||.||.||.|||.|.|||
BL01022___cbi    101 GCTATGTCGCCGTAATCGGCCATACAGGATCGGGAAAATCGACTTTGCTT    150

BSNT_00251___    112 CAGCACCTAAATGGTCTCCTGAAGCCGACGAAGGGACAGATATCACTAGG    161
                     ||||||||.||.||.||..|.||.|||||.||.|||||||||...||.||
BL01022___cbi    151 CAGCACCTGAACGGGCTTTTAAAACCGACAAAAGGACAGATACGCCTCGG    200

BSNT_00251___    162 C-AGCACTGTCATTCAGGCAGGGAAAAAGAATAAAGATCTGAAAAAACTT    210
                     | ||.|| ||..||.|.|||||.||||||||||||.||||  ||||.|||
BL01022___cbi    201 CGAGGAC-GTTCTTGAAGCAGGCAAAAAGAATAAACATCT--AAAAGCTT    247

BSNT_00251___    211 --CGTAAAAAAGTCGGAATCGTTTTCCAATTTCCTGAGCATCAATTATTC    258
                       ||.|||||.|||||.||.||.||.||.||||||||.|||||..|.||.
BL01022___cbi    248 TGCGGAAAAAGGTCGGCATTGTCTTTCAGTTTCCTGAACATCAGCTGTTT    297

BSNT_00251___    259 GAAGAAACAGTTCTTAAA-GATATTTCATTCGGACCGATGAACTTTGGTG    307
                     |||||||||.|| ||||| |||||..|||||||.|||||.||||||||..
BL01022___cbi    298 GAAGAAACAATT-TTAAAGGATATCGCATTCGGTCCGATCAACTTTGGCA    346

BSNT_00251___    308 TTA-----AAAAAGAAGATGCGGAACAAAAAGCGAGAGAGATGCTGCAGC    352
                     |.|     .|||||     ||||||.||||||||||.||.||||||.|||
BL01022___cbi    347 TGAGCCGGGAAAAG-----GCGGAAGAAAAAGCGAGGGAAATGCTGAAGC    391

BSNT_00251___    353 TTGTAGGTTTATCAGAAGAGCTTTTGGACAGGTCACCCTTTGAATTAAGC    402
                     |.||||||||....|.||||||.|..||||||||.||.||||||.|||||
BL01022___cbi    392 TGGTAGGTTTGGGTGCAGAGCTGTCCGACAGGTCTCCGTTTGAACTAAGC    441

BSNT_00251___    403 GGGGGACAAATGCGCAGAGTTGCAATTGCCGGCGTACTTGCAATGGACCC    452
                     ||.||.|||||||||.|.||.||.|||||.||.||.||.||.|||||.||
BL01022___cbi    442 GGAGGGCAAATGCGCCGCGTGGCCATTGCGGGAGTGCTGGCGATGGAGCC    491

BSNT_00251___    453 TGAAGTGCTTGTTCTGGATGAACCGACTGCAGGATTGGACCCAAGAGGGC    502
                     |||.||.|||||.||.|||||||||||.|||||..|.|||||||||||.|
BL01022___cbi    492 TGAGGTTCTTGTCCTCGATGAACCGACGGCAGGGCTTGACCCAAGAGGCC    541

BSNT_00251___    503 GAAAAGAGATTATGGACATGTTTTATGAG-CTTCATCAACGCGGGAACCT    551
                     |.||.|||||.|||||||||||.|| .|| ||.|||.|.|...|||||||
BL01022___cbi    542 GCAAGGAGATCATGGACATGTTCTA-CAGCCTCCATAAGCAGAGGAACCT    590

BSNT_00251___    552 GACGACGATCCTTGTGACACACAGCATGGAGGATGCAGCTGCATACGCTG    601
                     ||||||.||.||.||.||.|||||.|||||.||.||.||.||.||.||.|
BL01022___cbi    591 GACGACAATTCTCGTCACCCACAGTATGGAAGACGCGGCAGCGTATGCAG    640

BSNT_00251___    602 ATGAAATGATTGTTATGCATAAAGGAACGATACAAGCATCAGGCAGTCCG    651
                     |||||.|||||||.|||||||||||.|||.|..|||||..|||.|..|||
BL01022___cbi    641 ATGAACTGATTGTGATGCATAAAGGGACGGTCAAAGCAAAAGGGACGCCG    690

BSNT_00251___    652 CGTGATCTGTTTTTAAAGG-GTGAAGAGATGGCCGGCTGGGGGCTGGATC    700
                     ||.||.|| |||||.|||| ..||.||.||.||||..|..|||||.|||.
BL01022___cbi    691 CGGGAGCT-TTTTTCAAGGAAAGACGACATTGCCGCTTTAGGGCTTGATT    739

BSNT_00251___    701 TTCCTGAAACAATAAAATTCCAAAGACACCTTGAAGCTGTA----CTGGG    746
                     |.||.|||||.||.||||||||||.||.||||||||    |    |||||
BL01022___cbi    740 TGCCGGAAACGATTAAATTCCAAAAACGCCTTGAAG----AGACGCTGGG    785

BSNT_00251___    747 TGTGAGATTTAATGAGCCTATGCTCACAATCGAAGATGCCGCTGCTGAAA    796
                     ..|.|..||.||.|.|||.||..|.||.||.|||||.||.||..|.||| 
BL01022___cbi    786 GATTACGTTCAAAGCGCCGATTTTGACGATTGAAGAAGCAGCCTCCGAA-    834

BSNT_00251___    797 TCCGT----GCTCTTTTTCAGGGGGAGAAGACTTTATGA    831
                        ||    |||||||||||||.|||.||..|..|||||
BL01022___cbi    835 ---GTTAAAGCTCTTTTTCAGGAGGAAAATGCCCTATGA    870


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