Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00250 and BL01023
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:56
# Commandline: needle
# -asequence dna-align/BSNT_00250___ybxA.1.5803.seq
# -bsequence dna-align/BL01023___cbiO.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00250___ybxA-BL01023___cbiO.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00250___ybxA-BL01023___cbiO.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00250___ybxA
# 2: BL01023___cbiO
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 859
# Identity: 643/859 (74.9%)
# Similarity: 643/859 (74.9%)
# Gaps: 26/859 ( 3.0%)
# Score: 2328.0
#
#
#=======================================
BSNT_00250___ 1 ATGAATCAAAATCAGTTGAT--ATCG--GTAGAGGATATCGTATTTCGAT 46
|||||||||.|.| ||| |||| |.|||.||||||...|||||.|
BL01023___cbi 1 ATGAATCAAGAGC----GATTAATCGCTGCAGAAGATATCACGTTTCGCT 46
BSNT_00250___ 47 ATCGGAAGGACGCAGAAAGACGAGCACTAGACGGCGTCTCCCTGCAGGTG 96
|.|.|||.||.|||||.||.|..||.||.||...|||.||..|.||.|||
BL01023___cbi 47 ACCAGAAAGATGCAGACAGGCCTGCGCTTGATCACGTATCTTTCCATGTG 96
BSNT_00250___ 97 TATGAGGGTGAATGGCTTGCAATCGTAGGTCATAACGGTTCAGGGAAATC 146
|...|.||.|||||||||||.|||||.|||||.|||||||||||.||.||
BL01023___cbi 97 TCGAAAGGAGAATGGCTTGCGATCGTCGGTCACAACGGTTCAGGAAAGTC 146
BSNT_00250___ 147 AACACTGGCCCGGGCATTGAATGGTTTAATTCTTCCTGAATCAGG--CGA 194
.||.||.|||||.||.||.||.||..|.|||||.|||||...||| ||
BL01023___cbi 147 GACGCTCGCCCGTGCTTTAAACGGACTGATTCTGCCTGATGAAGGATCG- 195
BSNT_00250___ 195 CATTGAGGTTGCCGGGATTCAA-TTGACAGAGGAATCTGTTTGGGAAGTG 243
|||.|.||.|.|||.| |||| .||||.||.||..|.||.|||||.||.
BL01023___cbi 196 -ATTAAAGTAGGCGGTA-TCAAGCTGACGGAAGAGACGGTCTGGGATGTC 243
BSNT_00250___ 244 CGTAAGAAGATAGGTATGGTCTTTCAAAATCCGGATAACCAATTTGTCGG 293
||.||.|||.|.||.|||||.|||||||||||||||||||||||||||||
BL01023___cbi 244 CGAAAAAAGGTCGGCATGGTGTTTCAAAATCCGGATAACCAATTTGTCGG 293
BSNT_00250___ 294 AACGACTGTTCGCGATGATGTGGCTTTTGGTTTAGAAAACAATGGTGTAC 343
.||.||.||.|||||||||||||||||||||||||||||||..||.||.|
BL01023___cbi 294 GACAACCGTCCGCGATGATGTGGCTTTTGGTTTAGAAAACAGCGGAGTTC 343
BSNT_00250___ 344 CGCGGGAAGAAATGATTGAGAGAGTAGACTGGGCAGTAAAACAGGTTAAT 393
|..|.|||||.|||.|.||.||.||.||.|||||.||..|||||||.||.
BL01023___cbi 344 CAAGAGAAGACATGGTGGAAAGGGTGGATTGGGCCGTTCAACAGGTGAAC 393
BSNT_00250___ 394 ATGCAAGATTTTCTCGATCAAGAGCCGCACCATCTCTCCGGAGGCCAAAA 443
||||||||.|||||||||||||||||||||||||||||.|||||.|||||
BL01023___cbi 394 ATGCAAGAATTTCTCGATCAAGAGCCGCACCATCTCTCGGGAGGACAAAA 443
BSNT_00250___ 444 GCAGAGAGTTGCGATTGCGGGGGTTATTGCCGCACGTCCTGATATTATTA 493
||||.|.||||||||||||||.||..||||.||.||.|||||.||.||.|
BL01023___cbi 444 GCAGCGTGTTGCGATTGCGGGAGTGCTTGCTGCCCGGCCTGACATCATGA 493
BSNT_00250___ 494 TCTTAGATGAAGCAACATCCATGCTTGATCCGATCGGGCGAGAAGAAGTG 543
|..|.||.|||||.||.||||||||.||.|||||.|||||.|||||||||
BL01023___cbi 494 TTCTCGACGAAGCGACTTCCATGCTCGACCCGATGGGGCGGGAAGAAGTG 543
BSNT_00250___ 544 CTTGAAACGGTAAGACATTTAAAAGAGCAGGGCATGGCGACTGTCATATC 593
||.||.|||||.|||....|.|||||.||.||.||||..||.|||||.||
BL01023___cbi 544 CTGGATACGGTCAGAAGGCTGAAAGACCAAGGAATGGTTACGGTCATTTC 593
BSNT_00250___ 594 CATTACACATGATCTGGATGAGGCAGCAAAAGCAGACAGGATCATTGTCA 643
.|||||.|||||..|..|.||.||.||.||.||.|||.|||||||.||||
BL01023___cbi 594 GATTACCCATGACTTAAACGAAGCCGCGAAGGCCGACCGGATCATCGTCA 643
BSNT_00250___ 644 TGAATGGCGGTAAAAAATATGCTGAAGG---GCCGCCTGAAGAGATTTTT 690
||||..||||||.|||||.|||.||||| |||||..|||| |.|||
BL01023___cbi 644 TGAACAGCGGTAGAAAATTTGCCGAAGGCACGCCGCAGGAAG---TCTTT 690
BSNT_00250___ 691 AAATTGAATAAAGAACTTGTTCGAATCGGGCTTGATTTACCCTTCTCATT 740
....|||||.||||.||..||..|||||||||||||||.||.||.||.||
BL01023___cbi 691 CGTCTGAATCAAGATCTGATTAAAATCGGGCTTGATTTGCCATTTTCTTT 740
BSNT_00250___ 741 CCAGCTTAGCCA---GCTTTTAAGAGAAAATGGACTGGCTTTGGAAGAAA 787
.|||||.|.||| || |.||| ||||..||.||||||.||.|||...
BL01023___cbi 741 TCAGCTCACCCAAATGC--TGAAG-GAAAGCGGTCTGGCTCTGAAAGGCG 787
BSNT_00250___ 788 ACCATTTGACTCAGGAAGGGCTGGTGAAAGAGCTGTGGACATTACAATCA 837
|.|||.||||.||.|||||..|||||||.|||||.||||||||..|||||
BL01023___cbi 788 ATCATCTGACACAAGAAGGATTGGTGAATGAGCTATGGACATTGAAATCA 837
BSNT_00250___ 838 AAGATGTAG 846
|||||||||
BL01023___cbi 838 AAGATGTAG 846
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