Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00249 and BL01024

See Amino acid alignment / Visit BSNT_00249 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:56
# Commandline: needle
#    -asequence dna-align/BSNT_00249___rplQ.1.5803.seq
#    -bsequence dna-align/BL01024___rplQ.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00249___rplQ-BL01024___rplQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00249___rplQ-BL01024___rplQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00249___rplQ
# 2: BL01024___rplQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 363
# Identity:     323/363 (89.0%)
# Similarity:   323/363 (89.0%)
# Gaps:           0/363 ( 0.0%)
# Score: 1455.0
# 
#
#=======================================

BSNT_00249___      1 ATGTCATACAGAAAACTAGGACGTACGAGTGCACAGCGTAAAGCTATGCT     50
                     |||||||||||||||||||||||.||.|||||||||||||||||.|||||
BL01024___rpl      1 ATGTCATACAGAAAACTAGGACGCACTAGTGCACAGCGTAAAGCAATGCT     50

BSNT_00249___     51 TCGTGATCTTACAACTGATTTGATCATCAACGAAAGAATCGAAACAACTG    100
                     .||||||||||||||.||.||||||||||||||.|||||.||||||||.|
BL01024___rpl     51 GCGTGATCTTACAACAGACTTGATCATCAACGAGAGAATTGAAACAACAG    100

BSNT_00249___    101 AAACACGTGCGAAAGAACTTCGCTCTGTAGTTGAAAAAATGATCACGCTT    150
                     ||.|.||.||||||||||||||||||||.||.|||||||||||.||.|||
BL01024___rpl    101 AAGCTCGCGCGAAAGAACTTCGCTCTGTTGTAGAAAAAATGATTACACTT    150

BSNT_00249___    151 GGCAAACGCGGTGATCTTCACGCTCGTCGTCAAGCTGCTGCATACATCCG    200
                     |||||.|||||.|||.|.|||||.||.||.|||||.||||||||||||||
BL01024___rpl    151 GGCAAGCGCGGAGATTTACACGCACGCCGCCAAGCAGCTGCATACATCCG    200

BSNT_00249___    201 CAACGAGGTTGCAAACGAAGAAAATAACCAAGATGCACTTCAAAAATTAT    250
                     |||.|||||||||.|.|.|||.||.|||||||||||||||||||||.|.|
BL01024___rpl    201 CAATGAGGTTGCAGATGCAGAGAAAAACCAAGATGCACTTCAAAAACTTT    250

BSNT_00249___    251 TCTCTGACATTGCAACTCGTTACGAGGAGCGCCAAGGCGGATACACACGT    300
                     |||||||..|.|||.|||||||.||.||||||||||||||||||||||||
BL01024___rpl    251 TCTCTGATGTAGCACCTCGTTATGAAGAGCGCCAAGGCGGATACACACGT    300

BSNT_00249___    301 ATTATGAAGCTTGGTCCTCGCCGTGGTGACGGAGCACCAATGGCAATTAT    350
                     ||||||||||||||||||||||||||||||||||||||||||||.||.||
BL01024___rpl    301 ATTATGAAGCTTGGTCCTCGCCGTGGTGACGGAGCACCAATGGCTATCAT    350

BSNT_00249___    351 CGAATTGGTTTAA    363
                     |||||||||||||
BL01024___rpl    351 CGAATTGGTTTAA    363


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