Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00242 and BL01029
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:56
# Commandline: needle
# -asequence dna-align/BSNT_00242___map.1.5803.seq
# -bsequence dna-align/BL01029___map.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00242___map-BL01029___map.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00242___map-BL01029___map.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00242___map
# 2: BL01029___map
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 748
# Identity: 630/748 (84.2%)
# Similarity: 630/748 (84.2%)
# Gaps: 2/748 ( 0.3%)
# Score: 2666.0
#
#
#=======================================
BSNT_00242___ 1 ATGATTATCTGTAAAACCCCACGTGAACTTGGTATCATGCGGGAAGCAGG 50
||||||||.||||||||.||.||.|||.|.|..|||||||||||.||.||
BL01029___map 1 ATGATTATTTGTAAAACTCCCCGAGAAATCGAAATCATGCGGGAGGCCGG 50
BSNT_00242___ 51 GCGAATCGTGGCTTTAACTCATGAAGAGTTAAAAAAGCACATTAAACCAG 100
.|||||.||.||||||||||||.|.|||.|||||||||||||||||||.|
BL01029___map 51 ACGAATTGTCGCTTTAACTCATCAGGAGCTAAAAAAGCACATTAAACCCG 100
BSNT_00242___ 101 GAATCTCGACAAAAGAATTGGATCAAATTGCCGAACGTTTTATTAAGAAG 150
|.|||||||||||||||||||||||||||||||||||||||||||..|||
BL01029___map 101 GCATCTCGACAAAAGAATTGGATCAAATTGCCGAACGTTTTATTACAAAG 150
BSNT_00242___ 151 CAGGGTGCAATCCCATCTTTTAAGGGGTATAATGGGTTTCGCGGGAGCAT 200
||.||||||||||||||||||||.|||||||||||.||||||||||||||
BL01029___map 151 CAAGGTGCAATCCCATCTTTTAAAGGGTATAATGGTTTTCGCGGGAGCAT 200
BSNT_00242___ 201 TTGCGTATCAGTTAATGAAGAACTCGTTCACGGCATACCTGGCAGCAGGG 250
||||||.||.||.||.|||||||||||.|||||.||.||.||.|...|.|
BL01029___map 201 TTGCGTTTCGGTCAACGAAGAACTCGTGCACGGTATTCCGGGAAAACGAG 250
BSNT_00242___ 251 TGCTGAAGGACGGTGACATCATCAGTATTGATATCGGTGCTAAATTAAAT 300
|.||....|||||.|||||||||||.||.|||||||||||.||..||||.
BL01029___map 251 TCCTTCGCGACGGGGACATCATCAGCATCGATATCGGTGCGAAGCTAAAC 300
BSNT_00242___ 301 GGTTATCATGGTGACTCTGCATGGACATATCCGGTAGGAAACATCAGCGA 350
|||||||||||||||||.||.|||||.|||||.||.||.|..||||||||
BL01029___map 301 GGTTATCATGGTGACTCCGCTTGGACTTATCCAGTGGGTACGATCAGCGA 350
BSNT_00242___ 351 TGATGACAAAAAACTTCTGGAAGTGACAGAGGAGTCTTTATATAAAGGCT 400
||||||..|.||.||.|||||.||||||||||||||||||||||.|||||
BL01029___map 351 TGATGATCAGAAGCTGCTGGATGTGACAGAGGAGTCTTTATATAGAGGCT 400
BSNT_00242___ 401 TGCAGGAAGCAAAACCAGGTGAACGTTTGTCGAATATTTCCCACGCAATA 450
||.|||||||||||||.||.||||||||||||||||||||||||||||||
BL01029___map 401 TGAAGGAAGCAAAACCGGGAGAACGTTTGTCGAATATTTCCCACGCAATA 450
BSNT_00242___ 451 CAAACGTATGTCGAAAATGAGCAGTTTTCAGTTGTTAGGGAGTATGTCGG 500
||||||||||||||||..||.||.||||||||.||.|||||.|||||.||
BL01029___map 451 CAAACGTATGTCGAAAGCGAACAATTTTCAGTCGTCAGGGAATATGTAGG 500
BSNT_00242___ 501 ACATGGTGTTGGTCAAGACTTGCATGAGGACCCGCAAATTCCTCATTACG 550
|||.||.||.||.||.||..||||||||||.||||||||||||||.||||
BL01029___map 501 ACACGGGGTAGGGCAGGATCTGCATGAGGATCCGCAAATTCCTCACTACG 550
BSNT_00242___ 551 GTCCGCCCAACAAAGGACCACGGCTTAAA-CCTGGCATGGTTCTCGCTAT 599
|||||||.||||||||.||.| |.||||| |||||||||||..|.||.||
BL01029___map 551 GTCCGCCGAACAAAGGCCCGC-GTTTAAAGCCTGGCATGGTCTTGGCCAT 599
BSNT_00242___ 600 TGAACCTATGGTGAACGCTGGCAGCCGCTACGTGAAAACATTGGCTGATA 649
|||.||.|||||.||.||.||.|..|||||.||.||||||||||||||.|
BL01029___map 600 TGAGCCGATGGTCAATGCAGGTACACGCTATGTCAAAACATTGGCTGACA 649
BSNT_00242___ 650 ACTGGACGGTTGTAACGGTAGATGGGAAAAAGTGTGCTCATTTTGAACAT 699
||||||||||||||||.||.||.|||||.|||||||||||.||||||||.
BL01029___map 650 ACTGGACGGTTGTAACTGTGGACGGGAAGAAGTGTGCTCACTTTGAACAC 699
BSNT_00242___ 700 ACGATTGCGATTACGGAAACGGGTTTTGATATACTGACGAGAGTCTAG 747
||||||||.||||||||..|.||||||||.||||||||.|.||.||||
BL01029___map 700 ACGATTGCCATTACGGATGCCGGTTTTGAGATACTGACAAAAGCCTAG 747
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