Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00232 and BL01039

See Amino acid alignment / Visit BSNT_00232 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:55
# Commandline: needle
#    -asequence dna-align/BSNT_00232___rplE.1.5803.seq
#    -bsequence dna-align/BL01039___rplE.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00232___rplE-BL01039___rplE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00232___rplE-BL01039___rplE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00232___rplE
# 2: BL01039___rplE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 540
# Identity:     492/540 (91.1%)
# Similarity:   492/540 (91.1%)
# Gaps:           0/540 ( 0.0%)
# Score: 2268.0
# 
#
#=======================================

BSNT_00232___      1 ATGAACCGCCTTAAAGAAAAGTACAATAAAGAAATTGCACCTGCTTTAAT     50
                     ||||||||||||||||||||||||||||||||||||.|||||||.|||||
BL01039___rpl      1 ATGAACCGCCTTAAAGAAAAGTACAATAAAGAAATTACACCTGCATTAAT     50

BSNT_00232___     51 GACTAAGTTCAACTATGATTCAGTCATGCAAGTGCCTAAAATCGAAAAAA    100
                     ||..||||||.|.||..|.||.||.|||||||||||||||||||||||||
BL01039___rpl     51 GAAAAAGTTCGAATACAAATCTGTGATGCAAGTGCCTAAAATCGAAAAAA    100

BSNT_00232___    101 TCGTAATCAACATGGGTGTTGGTGACGCTGTTCAAAACGCCAAAGCAATC    150
                     ||||||||||||||||||||||||||||||||||||||||.|||||.|||
BL01039___rpl    101 TCGTAATCAACATGGGTGTTGGTGACGCTGTTCAAAACGCTAAAGCTATC    150

BSNT_00232___    151 GACAGTGCTGTTGAAGAATTAACGTTTATCGCAGGTCAAAAACCTGTCGT    200
                     ||.||.||||||||||||.|||||||||||||.|||||.|||||||||||
BL01039___rpl    151 GATAGCGCTGTTGAAGAACTAACGTTTATCGCTGGTCAGAAACCTGTCGT    200

BSNT_00232___    201 TACTCGTGCGAAGAAATCAATTGCTGGATTCCGTCTTCGTGAGGGAATGC    250
                     ||||||||||||||||||.|||||||||||||||||||||||.|||||||
BL01039___rpl    201 TACTCGTGCGAAGAAATCTATTGCTGGATTCCGTCTTCGTGAAGGAATGC    250

BSNT_00232___    251 CTATCGGTGCGAAAGTAACTCTTCGCGGAGAGCGCATGTATGATTTCCTT    300
                     |.||||||||||||||||||||||||||||||||||||||.|||||||||
BL01039___rpl    251 CAATCGGTGCGAAAGTAACTCTTCGCGGAGAGCGCATGTACGATTTCCTT    300

BSNT_00232___    301 GATAAACTTATTTCTGTATCTTTACCGCGTGTACGTGACTTCCGCGGGGT    350
                     ||||||||.||||||||.|||||||||||||||||||||||||||||..|
BL01039___rpl    301 GATAAACTAATTTCTGTTTCTTTACCGCGTGTACGTGACTTCCGCGGAAT    350

BSNT_00232___    351 TTCTAAAAAATCTTTCGACGGTCGCGGTAACTACACACTTGGTATCAAAG    400
                     |||.|||||||||||.|||||||||||.|||||||||||.||.|||||||
BL01039___rpl    351 TTCAAAAAAATCTTTTGACGGTCGCGGAAACTACACACTAGGAATCAAAG    400

BSNT_00232___    401 AACAGTTAATCTTCCCTGAAATTGACTACGATAAAGTAACAAAGGTTCGC    450
                     |||||.|.||||||||||||||||||||.|||||.|||||.||.||||||
BL01039___rpl    401 AACAGCTGATCTTCCCTGAAATTGACTATGATAAGGTAACTAAAGTTCGC    450

BSNT_00232___    451 GGAATGGACATCGTTATCGTAACAACTGCTAATACTGACGAAGAAGCTCG    500
                     ||.|||||.||||||||.|||||.|||||.||.|||||.|||||||||||
BL01039___rpl    451 GGTATGGATATCGTTATTGTAACGACTGCCAACACTGATGAAGAAGCTCG    500

BSNT_00232___    501 TGAGCTATTAACTCAAGTAGGTATGCCGTTCCAGAAATAA    540
                     |||.||.|||||||||.||||||||||.||||||||||||
BL01039___rpl    501 TGAACTGTTAACTCAATTAGGTATGCCATTCCAGAAATAA    540


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