Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00222 and BL01050

See Amino acid alignment / Visit BSNT_00222 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:54
# Commandline: needle
#    -asequence dna-align/BSNT_00222___rplW.1.5803.seq
#    -bsequence dna-align/BL01050___rplW.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00222___rplW-BL01050___rplW.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00222___rplW-BL01050___rplW.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00222___rplW
# 2: BL01050___rplW
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 288
# Identity:     263/288 (91.3%)
# Similarity:   263/288 (91.3%)
# Gaps:           0/288 ( 0.0%)
# Score: 1215.0
# 
#
#=======================================

BSNT_00222___      1 ATGAAAGATCCTCGTGATGTTCTAAAGCGCCCCGTCATTACTGAACGTTC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BL01050___rpl      1 ATGAAAGATCCTCGTGATGTTCTAAAGCGCCCCGTCATTACTGAACGTTC     50

BSNT_00222___     51 TGCTGATTTAATGACTGAAAAGAAATATACTTTTGAAGTTGATGTAAGAG    100
                     |||||||||||||||||||||.||||||||.|||||||||||.||||.||
BL01050___rpl     51 TGCTGATTTAATGACTGAAAAAAAATATACGTTTGAAGTTGACGTAAAAG    100

BSNT_00222___    101 CTAACAAAACAGAAGTGAAAGACGCGGTTGAAAGCATCTTTGGAGTGAAA    150
                     |.|||||||||||||||||||||||.||||||...|||||||||||||||
BL01050___rpl    101 CCAACAAAACAGAAGTGAAAGACGCTGTTGAACAAATCTTTGGAGTGAAA    150

BSNT_00222___    151 GTTGACAAAGTCAACATCATGAACTACAAAGGTAAATCAAAACGTGTTGG    200
                     |||||.||||||||||||||||||||||||||.||||..||||||||.||
BL01050___rpl    151 GTTGAAAAAGTCAACATCATGAACTACAAAGGGAAATTCAAACGTGTCGG    200

BSNT_00222___    201 ACGCTACACTGGTATGACTAGCCGTCGCAGAAAAGCGATCGTAAAACTTA    250
                     .||||||.||||||||||.|.|...||||||||||||||.||.||.||||
BL01050___rpl    201 CCGCTACTCTGGTATGACAAACAAACGCAGAAAAGCGATTGTTAAGCTTA    250

BSNT_00222___    251 CTGCAGACAGCAAAGAAATCGAAATTTTTGAAGCTTAA    288
                     |||.||||||||||||||||||||||||||||||||||
BL01050___rpl    251 CTGAAGACAGCAAAGAAATCGAAATTTTTGAAGCTTAA    288


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