Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01728 and BL01074

See Amino acid alignment / Visit BSNT_01728 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:13
# Commandline: needle
#    -asequence dna-align/BSNT_01728___hemY.1.5803.seq
#    -bsequence dna-align/BL01074___hemY.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01728___hemY-BL01074___hemY.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01728___hemY-BL01074___hemY.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01728___hemY
# 2: BL01074___hemY
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1473
# Identity:    1040/1473 (70.6%)
# Similarity:  1040/1473 (70.6%)
# Gaps:         120/1473 ( 8.1%)
# Score: 3528.5
# 
#
#=======================================

BSNT_01728___      1 ATGAGTG----AC---GGCAAAAAACATGTAGTCATCATCGGCGGCGGCA     43
                     |||||||    ||   ||||.|       |.|||||||||||||||||.|
BL01074___hem      1 ATGAGTGGAGAACGCAGGCAGA-------TTGTCATCATCGGCGGCGGTA     43

BSNT_01728___     44 TTACCGGTTTAGCCGCCGCCTTCTATATGGAAAAAGAAATCAAAGAAAAG     93
                     |||||||.||.||||||||||||||..||||.||.|||||||||.|.||.
BL01074___hem     44 TTACCGGGTTGGCCGCCGCCTTCTACTTGGAGAAGGAAATCAAAAAGAAT     93

BSNT_01728___     94 AATCTGCCGCTTGAAATGACGCTTGTTGAGGCAAGTCCGAGAGTCGGCGG    143
                     .||||.|||...|||.|.|||||||||||.|||||.||||||.|.|||||
BL01074___hem     94 GATCTCCCGGCCGAAGTCACGCTTGTTGAAGCAAGCCCGAGACTGGGCGG    143

BSNT_01728___    144 AAAAATCCAGACTGTCAAGAAGGACGGCTATATCATCGAAAGAGGGCCAG    193
                     |||.||.|||||.||..|.||.|||||||||.|.||.|||.|.||.||.|
BL01074___hem    144 AAAGATGCAGACGGTACACAAAGACGGCTATGTGATTGAACGGGGTCCGG    193

BSNT_01728___    194 ACTCATTTCTGGAACGAAAGAAAAGCGCCCCGCAGCTTGTTAAAGACTTA    243
                     |.||||||.|||||||.||..|||||||.||.|||||.||.||.||..|.
BL01074___hem    194 ATTCATTTTTGGAACGGAAACAAAGCGCACCTCAGCTCGTGAAGGATCTC    243

BSNT_01728___    244 GGTCTTGAGCATTTGCTTGTCAACAATGCGACCGGACAATCCTATGTGCT    293
                     ||.||.||||||||||||||.|||||||||||.||.||.||.||||||||
BL01074___hem    244 GGACTGGAGCATTTGCTTGTGAACAATGCGACTGGCCAGTCTTATGTGCT    293

BSNT_01728___    294 TGTAAACCGCACCCTGCATCCAATGCCGAAGGGCGCTGTAATGGGGATAC    343
                     |||.|.|...||.||..||||.||.|||.|.||.||.||.||||||.|.|
BL01074___hem    294 TGTCAGCGAAACGCTCTATCCGATTCCGGAAGGAGCCGTGATGGGGGTGC    343

BSNT_01728___    344 CGACAAAAATTGCGCCGTTTGTTTCTACGGGTCTGTTTTCTTTGTCTGGG    393
                     ||||||||||.|..||.|||.|..|.||.||..|||||||.|||.|.|||
BL01074___hem    344 CGACAAAAATCGGTCCTTTTCTGACAACCGGCTTGTTTTCCTTGCCGGGG    393

BSNT_01728___    394 AAGGCCAGAGCTGCAATGGATTTCATCCTGCCTGCAAGCAAAACAAAGGA    443
                     |||...|||||.|.|||||||||..|.||.||.||||||||..|..||||
BL01074___hem    394 AAGTTGAGAGCCGGAATGGATTTGGTGCTTCCAGCAAGCAAGCCGCAGGA    443

BSNT_01728___    444 TGATCAGTCATTGGGAGAATTCTTCCGCAGACGTGTCGGAGATGAAGTGG    493
                     .||.||.||..|.||||||||.|||.|.||.||.|||||.|.||||||||
BL01074___hem    444 AGACCAATCGCTCGGAGAATTTTTCAGAAGGCGCGTCGGCGGTGAAGTGG    493

BSNT_01728___    494 TCGAGAACTTAATCGAGCCGCTTCTATCAGGGATCTATGCAGGCGACATT    543
                     |.||||||.|.|||||.||||||.|.|||||.||.|||||.||.|||||.
BL01074___hem    494 TGGAGAACCTGATCGAACCGCTTTTGTCAGGCATTTATGCCGGGGACATC    543

BSNT_01728___    544 GACAAGCTCAGCCTGATGTCGACATTCCCGCAATTTTACCAGACAGAACA    593
                     |||...|||||.|||||||||||.||||||||.||.||.||||||||.||
BL01074___hem    544 GACCGTCTCAGTCTGATGTCGACTTTCCCGCAGTTCTATCAGACAGAGCA    593

BSNT_01728___    594 AAAGCATAGAAGCCTGATTCTCGGCATGAAAAAAACAAGGC-CTCAAGGC    642
                     .|||.|.||||||.||||..||||.|||||||||.|   || |    |||
BL01074___hem    594 GAAGTACAGAAGCTTGATCATCGGGATGAAAAAATC---GCGC----GGC    636

BSNT_01728___    643 TCAGGCCAGCAGCTGACGGCAAAG------------AAGCAAGGCCAGTT    680
                        |.|||| ||| |.||| ||||            |||.||||||||||
BL01074___hem    637 ---GCCCAG-AGC-GTCGG-AAAGCCTGCAAACAAAAAGAAAGGCCAGTT    680

BSNT_01728___    681 CCAGACTTTGTCAACCGGATTGCAAACCCTTGTTGAAGAGATCGAAAAGC    730
                     ||||||..||..||||||..||||.||..|.||||||||..|.|||||||
BL01074___hem    681 CCAGACGGTGAAAACCGGCCTGCAGACGATAGTTGAAGAATTGGAAAAGC    730

BSNT_01728___    731 AGTTAAAGC-TGACGAAGGTGTATAAAGGCACAAAAGTGACCAAGC-TCA    778
                     ||.| ..|| |.||.|||||.||||||||||||||.||       | |||
BL01074___hem    731 AGCT-CGGCATCACAAAGGTTTATAAAGGCACAAAGGT-------CGTCA    772

BSNT_01728___    779 GC------CGTGGCGGCTCTGGTTACTCGCTCGAA--TTGGATAACGGC-    819
                     ||      ||||..|||||.|.|||| .||..|||  || ||.|||||| 
BL01074___hem    773 GCATTGAGCGTGCGGGCTCGGCTTAC-AGCATGAAGCTT-GACAACGGCA    820

BSNT_01728___    820 --GTCACACTTGATGCTGATTCAGTAATTGTGACTGCTCCGCATAAAGCG    867
                       ||   .|||.|.||.|||||.|...|.||.||.|||||.||||||||.
BL01074___hem    821 AGGT---GCTTCACGCCGATTCGGCCGTGGTCACCGCTCCTCATAAAGCA    867

BSNT_01728___    868 GCTGCGGGAATGCTTTC----TGAGCTTCCTGCCATT-TCTCA----TTT    908
                     |||||.|..||| ||||    .|||        .||| .||.|    |||
BL01074___hem    868 GCTGCCGCGATG-TTTCAAAAAGAG--------GATTGGCTGAAGGGTTT    908

BSNT_01728___    909 GAAAAATATGCACTCCACATCGGTGGCAAATGTCGCTTTAGGTTTCCCTG    958
                     ..|..|||||...||.|||||.||.||.|||||.||..|.||.||.||.|
BL01074___hem    909 AGAGGATATGGTGTCAACATCTGTCGCCAATGTGGCGCTCGGATTTCCGG    958

BSNT_01728___    959 AAGGCTCCGTCGAGATGGAGCATGAGGGCACGGGTTTTGTTATTTCAAGA   1008
                     |||...|||||.|.|||||||||.|.||||||||.|||||.|||||||||
BL01074___hem    959 AAGAAGCCGTCCAAATGGAGCATCAAGGCACGGGCTTTGTCATTTCAAGA   1008

BSNT_01728___   1009 AACAGTGACTTTGCGATCACTGCCTGTACGTGGACGAATAAAAAATGGCC   1058
                     |||||.||.|||.|.||.||.||.|||||.|||||.||.|||||||||||
BL01074___hem   1009 AACAGCGATTTTTCCATTACGGCGTGTACCTGGACAAACAAAAAATGGCC   1058

BSNT_01728___   1059 GCACGCAGCTCCGGAAGGCAAAACGCTGCTTCGGGCATATGTCGGAAAAG   1108
                     |..|.||.|.||.|||||.|||...|||||..||||.|||||.||.||||
BL01074___hem   1059 GAGCACAACGCCTGAAGGAAAAGTCCTGCTAAGGGCTTATGTAGGGAAAG   1108

BSNT_01728___   1109 CTGGAGACGAATCCATTGTCGATCTATCAGATAATGACATTATCAACATT   1158
                     |.||.||.||.|||.|||||||.|..||.|||||.||.||..|.||.||.
BL01074___hem   1109 CCGGCGATGAGTCCGTTGTCGAACAGTCTGATAACGAAATGGTGAAAATC   1158

BSNT_01728___   1159 GTGTTAGAAGACTTAAA---GAAAGTCATGAACATAAACGGCGAGCCGGA   1205
                     ||..|.||.||.|||||   ||   |.|||||.||..|||||||.|||||
BL01074___hem   1159 GTCCTCGACGATTTAAAACGGA---TTATGAAGATCGACGGCGAACCGGA   1205

BSNT_01728___   1206 AATGACATGTGTCACCCGATGGCATGAAAGC-ATGCCGCAGTACCATGTC   1254
                     ||||||.||..||||..||||||||| |||| ||||||||.|||||||||
BL01074___hem   1206 AATGACCTGCATCACAAGATGGCATG-AAGCGATGCCGCAATACCATGTC   1254

BSNT_01728___   1255 GGCCATAAGCAGCGTATCAAGGAGCTGCGTGAAGCACTTGCATCTGCG--   1302
                     |||||||||.|..|.||.||.||..|..|.|||| .||||.|  .|||  
BL01074___hem   1255 GGCCATAAGAAAAGAATTAAAGAAATCAGGGAAG-GCTTGGA--AGCGTC   1301

BSNT_01728___   1303 -TATCCGGGTGTTTATATGACAGGCGCTTCTTTCGAAGGTGTCGGCATTC   1351
                      |||||||||||||..||.||.||.||.||.||.|||||.||||||||.|
BL01074___hem   1302 CTATCCGGGTGTTTTCATTACGGGGGCCTCATTTGAAGGGGTCGGCATCC   1351

BSNT_01728___   1352 CCGACTGCATTGATCAAGGAAA--AGCTGCCGTGTCTGA------CGCGC   1393
                     |.||.|||||.||.|||||.||  ||  |||||..|.||      |.|||
BL01074___hem   1352 CTGATTGCATCGACCAAGGCAAGCAG--GCCGTCGCCGATGTACTCTCGC   1399

BSNT_01728___   1394 TTACCTATTTATTCAGCTAA---   1413
                       ||||.||       |.||   
BL01074___hem   1400 --ACCTTTT-------CGAATAA   1413


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