Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01740 and BL01078

See Amino acid alignment / Visit BSNT_01740 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:14
# Commandline: needle
#    -asequence dna-align/BSNT_01740___yhfI.1.5803.seq
#    -bsequence dna-align/BL01078___yhfI.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01740___yhfI-BL01078___yhfI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01740___yhfI-BL01078___yhfI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01740___yhfI
# 2: BL01078___yhfI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 750
# Identity:     546/750 (72.8%)
# Similarity:   546/750 (72.8%)
# Gaps:          30/750 ( 4.0%)
# Score: 1905.0
# 
#
#=======================================

BSNT_01740___      1 ATGAAAGTTACAGTTATCGGATGCTATGGCGGTTTTCCGGCCGCAAATGA     50
                     |||||.||.|||||.|||||.||||..||.||.||||||||.||||||||
BL01078___yhf      1 ATGAAGGTGACAGTCATCGGCTGCTGCGGAGGATTTCCGGCTGCAAATGA     50

BSNT_01740___     51 AGCGACGTCAGGCTATTTGTTTCAGTCAGGTGATTACTCTCTGCTTGTT-     99
                     ||||||.|||||||||.|.|||||.||.||.||.||.||    |.|.|| 
BL01078___yhf     51 AGCGACTTCAGGCTATCTCTTTCAATCCGGGGACTATTC----CGTTTTA     96

BSNT_01740___    100 ---GATTGCGGCAGTGCCGTTTTGTC------TAAGCTGTTCGGATATGT    140
                        ||.|||||||||||||||||.||      |.|||||||      |.|
BL01078___yhf     97 ATCGACTGCGGCAGTGCCGTTTTATCCAAACTTCAGCTGTT------TCT    140

BSNT_01740___    141 GCCGGCGGAAAAGCTGGATGCGGTCGTTCTGTCTCATTATCACCATGACC    190
                     |||.|..||..||||.|||||.||..|..|.||.||||||||.|||||||
BL01078___yhf    141 GCCCGTTGAGGAGCTAGATGCCGTTATATTATCCCATTATCATCATGACC    190

BSNT_01740___    191 ATATCGCTGATATCGGGCCGCTGCAATTTGCCAAGCAAGTCGGTTCGTTT    240
                     ||||.||.|||.||||.||..|||||||||||||.|..|||||.||.||.
BL01078___yhf    191 ATATTGCGGATGTCGGCCCTTTGCAATTTGCCAAACTGGTCGGCTCATTC    240

BSNT_01740___    241 CTCGGCAAAGGAGAGCATACGCTTCCGATTTACGGACATGATGCTGATAT    290
                     ||||||||.||||.|.||.|.||||||||.||.||||||..|..||||..
BL01078___yhf    241 CTCGGCAAGGGAGCGGATGCCCTTCCGATATATGGACATCCTTTTGATGA    290

BSNT_01740___    291 AGAACAGTTTCAAAAGCTTACATATAAAACACATACGAAAGGGATCGCCT    340
                     |||.||||||..||||||||||||||||||.|||||....||..|.||.|
BL01078___yhf    291 AGAGCAGTTTTCAAAGCTTACATATAAAACGCATACCGCTGGATTGGCGT    340

BSNT_01740___    341 ATCAGCCGGATCAGCCGCTGACTGCCGGTCCGTTTACGATTACCTTTTTA    390
                     ||.|.|||...|||||..||.||..|||.|||||||||.|.||.||||||
BL01078___yhf    341 ATGATCCGACACAGCCTTTGGCTATCGGACCGTTTACGTTCACGTTTTTA    390

BSNT_01740___    391 AAAACGATTCACCC-GGTGACGTGCTATGCCATGCGGATTACTGACGGCA    439
                     ||||||.||||||| |.|||| ||||.|||||||.||.|.||.|||||..
BL01078___yhf    391 AAAACGGTTCACCCTGTTGAC-TGCTTTGCCATGAGGGTGACGGACGGTG    439

BSNT_01740___    440 GTCACACTGTTGTTTATACTGCTGATTCCAGCTATCAGGATTCATTTATA    489
                     .|||..||||.||||||||.||.||.||.||||.||||||..|.|||||.
BL01078___yhf    440 TTCATTCTGTCGTTTATACGGCCGACTCGAGCTTTCAGGAAGCCTTTATT    489

BSNT_01740___    490 CCGTT-TTCGAAAGATGCTGATTTATTGATCTCAGAATGCAATTTTTATG    538
                     ||||| ..||||.|| ||.|||.|.|||||||||||.|||||.|||||||
BL01078___yhf    490 CCGTTCAGCGAAGGA-GCCGATCTCTTGATCTCAGAGTGCAACTTTTATG    538

BSNT_01740___    539 CCGATCAAGACGGAACAAGTGCAGGCCATATGAACAGCCTGGAAGCCGGG    588
                     |.|||||.||.||.|..||.||.||.|||||||||||.||.|||||.|||
BL01078___yhf    539 CGGATCAGGATGGGAGGAGCGCCGGTCATATGAACAGTCTTGAAGCGGGG    588

BSNT_01740___    589 CGCATTGCAAAAGAAGCGGGAGCGGGAGAACTGCTGCTGACACATTTGCC    638
                     ||.||.||....||||||||.||.||..|.||.||..|||||||..|.||
BL01078___yhf    589 CGGATCGCTGCGGAAGCGGGTGCCGGGCAGCTTCTCTTGACACACCTCCC    638

BSNT_01740___    639 GCATTTTGGCGTGCATGACAATCT--TCGCAAAGAAGCGAAAACCGTTTT    686
                     ||||||.||.|..||..|.||.||  |.|  ||||.||..|||||||||.
BL01078___yhf    639 GCATTTCGGGGAACACCAAAAACTGATAG--AAGAGGCCCAAACCGTTTA    686

BSNT_01740___    687 TAACGGAGAAG-TGTATATTGCGAAATCAGGTTTTGTGTGGGAAGGATAA    735
                     |||.||.|..| ||| |.|.|||.|..|.||||.||||||||.||.|||.
BL01078___yhf    687 TAAAGGTGCGGTTGT-TCTGGCGCACACCGGTTATGTGTGGGGAGAATAG    735


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