Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01738 and BL01109
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:14
# Commandline: needle
# -asequence dna-align/BSNT_01738___gltT.1.5803.seq
# -bsequence dna-align/BL01109___gltT.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01738___gltT-BL01109___gltT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01738___gltT-BL01109___gltT.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01738___gltT
# 2: BL01109___gltT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1321
# Identity: 960/1321 (72.7%)
# Similarity: 960/1321 (72.7%)
# Gaps: 65/1321 ( 4.9%)
# Score: 3346.0
#
#
#=======================================
BSNT_01738___ 1 ATGAAAAGAATTAAGTTTGGATTAGCCACACAAATATTCGTTGGACTTAT 50
|||||||||.||||.||.|||||||||||||||||.|||.|.||.||.||
BL01109___glt 1 ATGAAAAGACTTAAATTCGGATTAGCCACACAAATTTTCCTCGGGCTGAT 50
BSNT_01738___ 51 TCTAGGTGT--CATTGTTGGCGTCATTTGGTATGGCAACCCAGC-ATTGC 97
|.||||||| || |..||.|..|||||||..||.||.||.|| .|||
BL01109___glt 51 TTTAGGTGTTGCA--GCAGGAGCGATTTGGTTCGGAAATCCTGCGGTTG- 97
BSNT_01738___ 98 CTACTTACCTGCAGCCAATCGGGGATCTCTTTTTACGCTTAATCAAAATG 147
|.||.||.||||||||..||||.|||.|.||.|||.|.||||||||||||
BL01109___glt 98 CAACGTATCTGCAGCCCGTCGGCGATTTGTTCTTAAGATTAATCAAAATG 147
BSNT_01738___ 148 ATAGTGATTCCTATTGTTGTCTCCAGCTTAATCATCGGTGTAGCCGGTGC 197
||.||||||||||||||.||.||.|||||.||..||||.||.||.||.||
BL01109___glt 148 ATTGTGATTCCTATTGTCGTTTCAAGCTTGATTGTCGGGGTTGCGGGGGC 197
BSNT_01738___ 198 AGGAAATGGAAAGCAAGTCGGTAAATTAGGCTTCAGAACGATTCTGTACT 247
.||.|..||.||..|.|||||.|...|.|||||..|.|||||.||.||||
BL01109___glt 198 CGGCAGCGGCAAAAAGGTCGGCAGGCTCGGCTTTCGGACGATCCTTTACT 247
BSNT_01738___ 248 TCGAGATCATCACGACTTTTGCCATTATTCTCGGACTAGCCCTTGCAAAC 297
|.||.|||||.|||||||||||.|||.|.||||||||...|||.|.||||
BL01109___glt 248 TTGAAATCATTACGACTTTTGCGATTGTGCTCGGACTTCTCCTCGGAAAC 297
BSNT_01738___ 298 ATCTTCCATCC-GGGTACAGGAGTTAA-TATACACGAAGCTCAAAAATCG 345
|||.|.||.|| |||.|| ||.||.|| |.|.| .|..|||.|||||..|
BL01109___glt 298 ATCATTCAGCCTGGGCAC-GGCGTAAACTTTTC-TGGTGCTGAAAAACAG 345
BSNT_01738___ 346 GACATCAGTCAATATGTTGAAACTGAAAAAGAACAAAGTAATAAATCAGT 395
||.|||||.||||||||.|||||.|||||||||..|||.|..|||||.||
BL01109___glt 346 GATATCAGCCAATATGTAGAAACAGAAAAAGAAGCAAGCACCAAATCTGT 395
BSNT_01738___ 396 GGCAGAAACGTTCCTCCATATTGTGCCGACAAACTTCTTCCAGTCATTGG 445
.|||||.||||||||.||.|||||||||||||||||.||||||||..|.|
BL01109___glt 396 CGCAGACACGTTCCTGCACATTGTGCCGACAAACTTTTTCCAGTCGCTCG 445
BSNT_01738___ 446 TCGAAGGGGATCTTCTAGCCATCATTTGCTTTACAGTACTATTTGCATTG 495
..|||||.|||||.||.||.|||||||||||.||.||.||.||.|||.|.
BL01109___glt 446 CTGAAGGCGATCTGCTTGCGATCATTTGCTTCACTGTTCTGTTCGCACTC 495
BSNT_01738___ 496 GGTATTTCCGCAATCGGTGAAAGAGGCAAGCCTGTATTAGCCTTTTTTG- 544
||..|.||.||.||.||.||||.||||||||||||..|..|||||||.|
BL01109___glt 496 GGGGTGTCTGCCATAGGCGAAAAAGGCAAGCCTGTGCTCTCCTTTTTCGA 545
BSNT_01738___ 545 ---AAGGTGTATCCCATGCCATGTTCCACGTTGTAAACCTTGTGATGAAA 591
||.| ||.||.||||||||||||||.||.|||.|.||.||||||
BL01109___glt 546 GGCAACG----TCTCAAGCCATGTTCCACGTCGTCAACATCGTTATGAAA 591
BSNT_01738___ 592 GTGGCGCCATTCGGCGTTTTCGCTCTTATCGGAGTGACTGTGTCTAAATT 641
.|.|||||.|||||||||||.|||.|.||.||.|||||.||.||.|||||
BL01109___glt 592 TTCGCGCCGTTCGGCGTTTTTGCTTTAATTGGCGTGACGGTTTCAAAATT 641
BSNT_01738___ 642 CGGACTCGGTTCTCTTATCTCTCTCGGAAAGCTCGTTGGATTGGTTTATG 691
.||..|...|||.|||.|.||..|.||||||||||||..|.|.||.||..
BL01109___glt 642 TGGTTTTTCTTCGCTTTTATCATTGGGAAAGCTCGTTTTACTTGTCTACC 691
BSNT_01738___ 692 TCGCGCTTGCTTTCTTCTTAATTGTTATTTTCGGGATTGTC-GCAAAAAT 740
|.||.||||||||||||||.||.|||||.||.|||||.||| ||||...|
BL01109___glt 692 TGGCTCTTGCTTTCTTCTTGATCGTTATCTTTGGGATCGTCGGCAAGCTT 741
BSNT_01738___ 741 TGCCGGCATCAGCATCTTCAAGTTCCTTGCTTACATGAAGGACGA-AATC 789
|| |||.||||..||.||.||.||..|.||||...||||.||.|| ..||
BL01109___glt 742 TG-CGGTATCAATATATTTAAATTTTTGGCTTTTTTGAAAGATGAGCTTC 790
BSNT_01738___ 790 TTACTGGCGTTCAGTACGTCCAGCTCTGAAACGGTTCTTCCGCGCATCAT 839
|| ||.||||.||||||.||.|||||||||||.||.|||||||||.||||
BL01109___glt 791 TT-CTTGCGTACAGTACATCAAGCTCTGAAACCGTGCTTCCGCGCGTCAT 839
BSNT_01738___ 840 GGAAAAAATGGAGAAAATCGGATGTCCGAAAGGAATTGTTTCATTTGTCA 889
||||||.||||||||||||||.||.||||||||.||.||.||.|||||||
BL01109___glt 840 GGAAAAGATGGAGAAAATCGGCTGCCCGAAAGGCATCGTGTCGTTTGTCA 889
BSNT_01738___ 890 TTCCGATCGGTTACACGTTTAACTTAGACGGTTCCGTTCTCTATCAATCT 939
||||||||||.||.||.||||||.|.|||||.||.||.||.||||||.|.
BL01109___glt 890 TTCCGATCGGCTATACATTTAACCTTGACGGCTCTGTCCTGTATCAAGCG 939
BSNT_01738___ 940 ATTGCCGCACTCTTTTTAGCACAGGTATATGGCATTGATTTGACGATTTG 989
||.||.||.||.|||.|.||.|||||.||.|||||.|||.|..|.|||.|
BL01109___glt 940 ATCGCGGCGCTGTTTCTGGCGCAGGTCTACGGCATCGATCTATCCATTGG 989
BSNT_01738___ 990 GCACCAGATTACGCTTGTGCTCGTCTTAATGGTGTCATCTAAAGGGATGG 1039
.||.|||.|.|||.|..|.||.||..|.|||||..|.||||||||.||||
BL01109___glt 990 ACAGCAGCTCACGTTAATCCTTGTTCTGATGGTCACTTCTAAAGGTATGG 1039
BSNT_01738___ 1040 CTGCCGTGCCTGGTACTTCTTTTGTTG-TCTTGCTTGCAACGCTTGGCAC 1088
|||||||.||.||.||.|||||.||.| |||| |||||.||..|.|||||
BL01109___glt 1040 CTGCCGTTCCCGGCACATCTTTCGTCGTTCTT-CTTGCGACTTTGGGCAC 1088
BSNT_01738___ 1089 CATCGGCGTTCCGGCTGAAGGACTTGCCTTTATTGCCGGCGTAGACCGCA 1138
.|||||||||||.||||||||.||.|||||.||||||||.||.|||||.|
BL01109___glt 1089 GATCGGCGTTCCTGCTGAAGGGCTGGCCTTCATTGCCGGAGTCGACCGGA 1138
BSNT_01738___ 1139 TCATGGATATGGCACGAACAGTTGTCAACCTGACTGGTAACGCGCTTGCT 1188
|.|||||.|||||..||||.||.||||||.||||.||.|||||.||.||.
BL01109___glt 1139 TTATGGACATGGCGAGAACGGTCGTCAACTTGACCGGAAACGCTCTCGCC 1188
BSNT_01738___ 1189 GCCGTTGTGATGTCTAAATGGGAAGGCATGTTTAAT------CCTGCGAA 1232
||.||.||.|||||.||||||||||| |.||| || |..||
BL01109___glt 1189 GCTGTGGTCATGTCAAAATGGGAAGG-----TGAATATGACGCC-GTTAA 1232
BSNT_01738___ 1233 A--GCAGAAACTGTTATGTCCCAATCGAAAA----------CAGA-ACAA 1269
| ||||||..|.||| |||| || |||| |.|.
BL01109___glt 1233 AGGGCAGAACGTCTTA------AATC---AACGGGAGCCGGCAGATATAG 1273
BSNT_01738___ 1270 AACGCAACCATTTCTGGTTAA 1290
|| .|.||.||.|.|
BL01109___glt 1274 AA-------GTATCCGGCTGA 1287
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