Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04013 and BL01132
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:04
# Commandline: needle
# -asequence dna-align/BSNT_04013___yrzD.1.5803.seq
# -bsequence dna-align/BL01132___yrzD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04013___yrzD-BL01132___yrzD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04013___yrzD-BL01132___yrzD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04013___yrzD
# 2: BL01132___yrzD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 307
# Identity: 230/307 (74.9%)
# Similarity: 230/307 (74.9%)
# Gaps: 20/307 ( 6.5%)
# Score: 817.0
#
#
#=======================================
BSNT_04013___ 1 GTGGAGAAGCATCCAGCCGATCTATATAAAGACCACGTCAGGCCGTTTCT 50
.|||..||.|||||.||.|||||.||.||.||.||..|.|..||.|||||
BL01132___yrz 1 ATGGGCAAACATCCGGCTGATCTGTACAAGGATCATTTAAAACCCTTTCT 50
BSNT_04013___ 51 TTACAGCAA-ACTGGAAGAGTTTAAGATTCTCGGGTATGATGATGTTGAA 99
|..|||||| || |||||||||||..||.|||||.|||||.|||.|||||
BL01132___yrz 51 TCGCAGCAAGAC-GGAAGAGTTTAGAATACTCGGTTATGACGATATTGAA 99
BSNT_04013___ 100 CTCGA--AAGTTTGTGGTCATACTTAACAGATAAGAAGTGGAAAAA---G 144
.|.|| || |||||||||||||||....|||||||.|||||.|| |
BL01132___yrz 100 ATAGAGGAA--TTGTGGTCATACTTATTGAATAAGAAATGGAAGAACCGG 147
BSNT_04013___ 145 AAAACGGAACTGAGC--ATTTATGAACTGGCGAGTGATATTTTATCAGTG 192
|| ||| ||..| |||.|..|.|||||..|||||||||||||.|||
BL01132___yrz 148 AA---GGA--TGTTCAAATTCACCAGCTGGCCGGTGATATTTTATCTGTG 192
BSNT_04013___ 193 AAAATTGGCGAATTTATGAACTATGCAACCGTTGAGTCATTTAAAACGTC 242
||||||||||||||||||||||||||||||||.||.||.|||||||||||
BL01132___yrz 193 AAAATTGGCGAATTTATGAACTATGCAACCGTAGAATCGTTTAAAACGTC 242
BSNT_04013___ 243 TAATTGGCTGGGCAGTGAAGAGGGCCAGGAAGCAT--TGGAAGAACTGCT 290
|||||..||.|.|||..||||.||.||||| .|| |.||.||.|||||
BL01132___yrz 243 TAATTTACTCGACAGCAAAGAAGGGCAGGA--TATGCTCGATGAGCTGCT 290
BSNT_04013___ 291 GAGATAG 297
|||.|||
BL01132___yrz 291 GAGGTAG 297
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