Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04022 and BL01143
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:04
# Commandline: needle
# -asequence dna-align/BSNT_04022___ruvB.1.5803.seq
# -bsequence dna-align/BL01143___ruvB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04022___ruvB-BL01143___ruvB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04022___ruvB-BL01143___ruvB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04022___ruvB
# 2: BL01143___ruvB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1019
# Identity: 755/1019 (74.1%)
# Similarity: 755/1019 (74.1%)
# Gaps: 28/1019 ( 2.7%)
# Score: 2722.0
#
#
#=======================================
BSNT_04022___ 1 ATGGATGAACGGCTCGTCTCAAGTGAAGCAGACAACCATGAATCAGTGAT 50
||||||||.|||||.||.|||||||||..|||||||||||||||||.|||
BL01143___ruv 1 ATGGATGAGCGGCTTGTATCAAGTGAACTAGACAACCATGAATCAGCGAT 50
BSNT_04022___ 51 AGAGCAAAGCCTGAGGCCGCAAAATCTGGCACAGTATATCGGGCAGCATA 100
.||||||||.|||.|.|||||||..||.||.|||||||||||.|||.|.|
BL01143___ruv 51 TGAGCAAAGTCTGCGTCCGCAAAGACTTGCTCAGTATATCGGCCAGGAAA 100
BSNT_04022___ 101 AGGTAAAAGAAAATTTGCGCGTGTTTATAGATGCGGCGAAAATGAGACAG 150
|.||.|||||.||..|....||.||.||.||.||.|||||||||.|..||
BL01143___ruv 101 AAGTGAAAGATAACCTCAAGGTTTTCATCGAAGCTGCGAAAATGCGGGAG 150
BSNT_04022___ 151 GAGACGCTGGATCATGTTCTT-CTGTACGGGCCGCCCGGACTCGGAAAAA 199
||.||.||.||.|||| |||| .|||||||||||||.|||.|.|||||||
BL01143___ruv 151 GAAACCCTTGACCATG-TCTTATTGTACGGGCCGCCGGGATTGGGAAAAA 199
BSNT_04022___ 200 CAACGCTTGCTTCGATTGTTGCTAATGAAATGGGAGTGGAAT-TGCGGAC 248
|.|||||.||..||||..|.||.||.||||||||||| .||| |..|.||
BL01143___ruv 200 CGACGCTCGCCGCGATCATCGCCAACGAAATGGGAGT-CAATCTCAGAAC 248
BSNT_04022___ 249 GACATCAGGGCCTGCGATTGAAAGGCCTGGTGATTTGGCTGCTATATTAA 298
|||.|||||.||.|||||.||..|.||.|||||||||||.||.|||||||
BL01143___ruv 249 GACGTCAGGTCCGGCGATCGAGCGCCCCGGTGATTTGGCGGCGATATTAA 298
BSNT_04022___ 299 CGGCGCTGGAACCGGGAGATGTATTATTTATTGATGAAATACATAGGCTG 348
||||.|||||.||.||.||.||.||||||||.||.||.||.||..|.|||
BL01143___ruv 299 CGGCTCTGGAGCCAGGTGACGTTTTATTTATAGACGAGATCCACCGCCTG 348
BSNT_04022___ 349 CACAGATCGATCGAAGAGGTGCTTTATCCTGCAATGGAAGACTTTTGCCT 398
|||.|.|||||||||||||||||.||||||||.||||||||.||.|||||
BL01143___ruv 349 CACCGTTCGATCGAAGAGGTGCTGTATCCTGCGATGGAAGATTTCTGCCT 398
BSNT_04022___ 399 GGACATTGTGATTGGCAAAGGCCCATCTGCCCGCTCGGTTCGCCTCGACC 448
.||.||.|||||.||||||||.||.||.||.||.||.||..|.|||||.|
BL01143___ruv 399 TGATATCGTGATCGGCAAAGGACCGTCGGCACGTTCTGTGAGGCTCGATC 448
BSNT_04022___ 449 TTCCGCCTTTTACGCTGGTGGGAGCCACGACGAGGGTGGGGCTTTTGACG 498
||||.||||||||.||.||.||.||.||.||.|||||.||||||||.||.
BL01143___ruv 449 TTCCTCCTTTTACCCTCGTCGGCGCGACCACAAGGGTTGGGCTTTTAACC 498
BSNT_04022___ 499 GCTCCTTTAAGAGACAGATTCGGCGTAATGTCTCGCCTTGAGTACTATAC 548
||.|||.|.||.|||||.||||||||..||||..|.||||||||.||.||
BL01143___ruv 499 GCGCCTCTCAGGGACAGGTTCGGCGTTCTGTCGAGGCTTGAGTATTACAC 548
BSNT_04022___ 549 ACAAGAAGAACTGGCGGATATTGTCACAAGAACCGCTGATGTATTCGAGG 598
.|..||.||.||..|.||.||.||.|..|||||.||.||..|.||.||.|
BL01143___ruv 549 GCGTGATGAGCTTTCAGAGATCGTGATCAGAACGGCAGAGCTGTTTGAAG 598
BSNT_04022___ 599 TTGAGATTGATAAACCGTCGGCTCTTGAAATTGCAAGAAGATCGAGAGGG 648
|.||.||.|||...|..||||||||.|||||.||.|||.|.||.||||||
BL01143___ruv 599 TCGACATCGATTCGCTCTCGGCTCTCGAAATCGCGAGACGGTCAAGAGGG 648
BSNT_04022___ 649 ACGCCCCGCGTGGCGAACCGCCTGCTGAGAAGGGTGCGCGATTTCGCCCA 698
|||||.||..|.||.|||.|.||..|.||.|||||..|.|||||.|||||
BL01143___ruv 649 ACGCCGCGGATTGCCAACAGGCTTTTAAGGAGGGTCAGGGATTTTGCCCA 698
BSNT_04022___ 699 AGTGCTGGGTGACAGCAGGATTACGGAAGACATTTCTCAG--------AA 740
.|||||.||..|||||...||.||.||.|| || .|
BL01143___ruv 699 GGTGCTTGGAAACAGCTCCATCACAGAGGA--------AGTGGCGGTTGA 740
BSNT_04022___ 741 TGCGCTGGAGCGGCTTCAGGTTGACCGTCTCGGTTTGGATCATATTGATC 790
||||||.||.||.||.||||||||....|||||..|.||.|||||.||.|
BL01143___ruv 741 TGCGCTTGAACGCCTCCAGGTTGATAAACTCGGGCTTGACCATATCGACC 790
BSNT_04022___ 791 ATAAGCTGCTGATGGGCATGATCGAAAAATTCAACGGCGGCCCAGTAGGC 840
..|||||..||||||||||||||||||||||...|||||||||.||.|||
BL01143___ruv 791 GCAAGCTTTTGATGGGCATGATCGAAAAATTTGGCGGCGGCCCCGTCGGC 840
BSNT_04022___ 841 CTTGATACGATTTCAGCTACCATCGGCGAGGAATCGCATACGATTGAAGA 890
.|.|||||||||||.|||||.|||||.|||||.||.||.||||||||.||
BL01143___ruv 841 ATCGATACGATTTCGGCTACTATCGGTGAGGAGTCTCACACGATTGAGGA 890
BSNT_04022___ 891 CGTATATGAACCATATCTGCTGCAAATTGGATTTATACAAAGAACGCCGC 940
.||.|||||.||.|||||.||.|||||.||.|||||.|||||||||||||
BL01143___ruv 891 TGTGTATGAGCCGTATCTTCTTCAAATCGGTTTTATTCAAAGAACGCCGC 940
BSNT_04022___ 941 GTGGAAGGATCGTGACACCGGCCGTTTATCA-TCATTTCCAAATGGAGGC 989
|.||..|.|||||.||.||.|..||||| || .||.||..|||||||||.
BL01143___ruv 941 GGGGGCGCATCGTAACCCCTGATGTTTA-CAGCCACTTTAAAATGGAGGT 989
BSNT_04022___ 990 TCC---CCGATATGACTGA 1005
||| || ||||||||
BL01143___ruv 990 TCCGAACC---ATGACTGA 1005
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