Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04054 and BL01159

See Amino acid alignment / Visit BSNT_04054 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:06
# Commandline: needle
#    -asequence dna-align/BSNT_04054___obgE.1.5803.seq
#    -bsequence dna-align/BL01159___obgE.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04054___obgE-BL01159___obgE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04054___obgE-BL01159___obgE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04054___obgE
# 2: BL01159___obgE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1300
# Identity:    1017/1300 (78.2%)
# Similarity:  1017/1300 (78.2%)
# Gaps:          26/1300 ( 2.0%)
# Score: 3911.0
# 
#
#=======================================

BSNT_04054___      1 ATGTTTGTAGATCAGGTCAAAGTATATGTAAAAGGCGGCGACGGCGGCAA     50
                     ||||||||.||||||||.|||.||||.|||||||||||.|||||.|||||
BL01159___obg      1 ATGTTTGTTGATCAGGTGAAAATATACGTAAAAGGCGGAGACGGAGGCAA     50

BSNT_04054___     51 CGGTATGGTTGCGTTTCGCCGTGAAAAATATGTGCCGAAAGGCGGCCCTG    100
                     ||||||||||||.||.|||||.||||||||||||||.|||||.|||||||
BL01159___obg     51 CGGTATGGTTGCTTTCCGCCGCGAAAAATATGTGCCAAAAGGAGGCCCTG    100

BSNT_04054___    101 CCGGCGGTGACGGAGGAAAGGGAGGAGACGTCGTTTTTGAAGTAGATGAA    150
                     ||||.||||||||.|||||.||.||||||||||||||..||||.||.|||
BL01159___obg    101 CCGGAGGTGACGGCGGAAAAGGCGGAGACGTCGTTTTCAAAGTTGACGAA    150

BSNT_04054___    151 GGTCTCCGCACCCTGATGGATTTTAGATACAAAAAACACTTTAA---AGC    197
                     ||||||.||||.|||||||||||||||||..|||.|||.|||||   |||
BL01159___obg    151 GGTCTCAGCACGCTGATGGATTTTAGATATCAAAGACATTTTAAGGCAGC    200

BSNT_04054___    198 GATTCGCGGCGAGCATGGCATGTCCAAAAACCAGCACGGACGAAATGCTG    247
                     |   |||||.||.||.||||||||.||||||||||||||.||||||||.|
BL01159___obg    201 G---CGCGGAGAACACGGCATGTCTAAAAACCAGCACGGCCGAAATGCCG    247

BSNT_04054___    248 ATGATATGGTCATTAAAGTTCCGCCGGGCACCGTTGTGACAGACGATGAT    297
                     |.||.|||||..|.|||||.|||||.|||||.|||||.|..|||||||||
BL01159___obg    248 AAGACATGGTTGTGAAAGTCCCGCCCGGCACGGTTGTCATTGACGATGAT    297

BSNT_04054___    298 ACGAAACAGGTCATCGCTGATTTAACAGAGCACGGACAGCGGGCTGTCAT    347
                     ||.|||||||||||||||||||||||.||||||||||||...||.|||||
BL01159___obg    298 ACAAAACAGGTCATCGCTGATTTAACGGAGCACGGACAGGAAGCCGTCAT    347

BSNT_04054___    348 TGCAAGAGGCGGAAGAGGCGGAAGAGGAAATAGCCGCTTTGCTACACCGG    397
                     .||||.|||.|||.|.||||||.|.||.||||..||.|||||.||.||.|
BL01159___obg    348 CGCAAAAGGGGGACGCGGCGGACGGGGCAATACACGTTTTGCGACGCCTG    397

BSNT_04054___    398 CTAATCCCGCGCCTCAGCTTTCAGAAAACGGCGAGCCGGGAAAAGAACGC    447
                     |.||.||.|||||.||||||||.|||||||||||.||.||.||.||.|||
BL01159___obg    398 CCAACCCGGCGCCGCAGCTTTCTGAAAACGGCGAACCCGGCAAGGAGCGC    447

BSNT_04054___    448 TACATTGTTCTTGAATTAAAAGTGCTTGCAGATGTCGGACTTGTCGGGTT    497
                     ||.||||||||.||..|.|||||..|.|||||||||||.||||||||.||
BL01159___obg    448 TATATTGTTCTCGAGCTGAAAGTTTTGGCAGATGTCGGTCTTGTCGGCTT    497

BSNT_04054___    498 CCCGAGTGTGGGAAAATCTACTTTGCTGTCTGTTGTCTCATCTGCAAAAC    547
                     |||.||.||.||||||||.||..|.||||||||.||.||.||.||.||.|
BL01159___obg    498 CCCAAGCGTCGGAAAATCAACGCTCCTGTCTGTCGTGTCTTCGGCCAAGC    547

BSNT_04054___    548 CGAAAATTGCGGACTATCACTTTACAACGCTTGTCCCAAATCTCGGCATG    597
                     ||||||||||.||.||.||||||||||||||...|||.||||||||.|||
BL01159___obg    548 CGAAAATTGCCGATTACCACTTTACAACGCTGAACCCGAATCTCGGAATG    597

BSNT_04054___    598 GTTGAAACGGATGACGGACGCAGCTTTGTCATGGCCGATTTGCCGGGGCT    647
                     ||.||||||||.|||||.|||||||||||.|||||.|||.|.|||||.||
BL01159___obg    598 GTCGAAACGGAAGACGGCCGCAGCTTTGTAATGGCGGATCTTCCGGGACT    647

BSNT_04054___    648 GATTGAAGGCGCACACCAAGGCGTCGGACTTGGCCACCAGTTTTTGCGCC    697
                     ||||||.||.||.|||.||||.||.||.||.||.|||||.||..|..|.|
BL01159___obg    648 GATTGAGGGGGCGCACGAAGGAGTTGGCCTCGGACACCAATTCCTCAGGC    697

BSNT_04054___    698 ATATTGAACGGACGAGGGTTATTGTTCATGTCATTGACATGTCAGG-CTT    746
                     ||||.|||.|.|||.|.||.||.||.||.||.|||||||||||.|| |||
BL01159___obg    698 ATATCGAAAGAACGCGCGTCATCGTGCACGTTATTGACATGTCGGGTCTT    747

BSNT_04054___    747 AGAAGGCCGTGATCCATATGATGATTATCTTACGATTAACCAGGAGC-TG    795
                      |||||.||.||.||.|||||.||||||.|.||.|||||..|.|||| ||
BL01159___obg    748 -GAAGGGCGCGACCCGTATGAAGATTATGTGACCATTAATAAAGAGCTTG    796

BSNT_04054___    796 AGCGAGTACAATCTGCGTCTCACTGAGCGTCCGCAAATTATCGTTGCAAA    845
                     |.| ||||.|||||..|.||.||.||.|||||.||||||||.||.||.||
BL01159___obg    797 AAC-AGTATAATCTCAGGCTGACAGAACGTCCTCAAATTATTGTCGCCAA    845

BSNT_04054___    846 TAAAATGGACATGCCGGAGGCTGCGGAAAATCTCGAAGCCTTT-AAAGAA    894
                     |||||||||.||||||||.||.|..|||||||| ||||.|||| ||||||
BL01159___obg    846 TAAAATGGATATGCCGGATGCGGAAGAAAATCT-GAAGGCTTTCAAAGAA    894

BSNT_04054___    895 AAGCTGACGGATGATTATCCGGTATTCCCGATCAGTGCGGTGACAAGAGA    944
                     |||||.||.|||||||||||.||.||.||.|||||.||||||||.|||.|
BL01159___obg    895 AAGCTCACAGATGATTATCCTGTTTTTCCAATCAGCGCGGTGACCAGACA    944

BSNT_04054___    945 AGGTCTGCGTGAGCTTCTGTTTGAGGTTGCCAATCAGCTTGAGAAC-ACA    993
                     |||..||.|.||.||.||||||||..|||||.| |.|.|||..||| ||.
BL01159___obg    945 AGGCTTGAGGGATCTGCTGTTTGAAATTGCCGA-CCGTTTGGAAACGACG    993

BSNT_04054___    994 CCGGAATTCCCGCTGTATGACGAGGAAGA----GCTTACACAAAACCGTG   1039
                     ||||||||||||||.||.|||||.|||||    |||    .|||||.|.|
BL01159___obg    994 CCGGAATTCCCGCTCTACGACGAAGAAGACATGGCT----GAAAACAGAG   1039

BSNT_04054___   1040 TCATGTACACGATGGAAAATGAAGAAGTGCCATTTAACATTACACGCGAT   1089
                     |||||||.|.|.|.||..||||.||||.|||.|||.|.||.|..||.|||
BL01159___obg   1040 TCATGTATAAGCTTGAGGATGAGGAAGCGCCGTTTGAGATCAGCCGTGAT   1089

BSNT_04054___   1090 CCAGACGGTGTATTTGTGCTTTCA--GGAGACAGCCTTGAGCGGTTATTC   1137
                     ||.|||||....||.||||  |||  ||||.||..|||||.||.|||||.
BL01159___obg   1090 CCTGACGGCACCTTCGTGC--TCAGCGGAGCCAAGCTTGAACGCTTATTT   1137

BSNT_04054___   1138 AAGATGACTGATTTCTCACGTGATGAATCGGTTAAACGGTTTGCAAGACA   1187
                     ||.|||||.||.||.|||.|.|||||.||.|||||.||.|||||.|||||
BL01159___obg   1138 AAAATGACGGACTTTTCAAGAGATGAGTCTGTTAAGCGTTTTGCCAGACA   1187

BSNT_04054___   1188 GATGCGCGGAATGGGTGTTGATGAAGCACTCAGAGAACGCGGAGCCAAGG   1237
                     |.|.|||||||||||.||.|||||.||.||..|.|..|||||.||.||.|
BL01159___obg   1188 GCTTCGCGGAATGGGCGTCGATGATGCGCTTCGGGCCCGCGGTGCAAAAG   1237

BSNT_04054___   1238 ATGGAGATATAATCAGGCTTCTGGAATTTGAATTTGAATTTATTGATTAA   1287
                     |.||.||||..|||.|.|||||.||||||||||||||||||||.||.|.|
BL01159___obg   1238 ACGGGGATACGATCCGTCTTCTCGAATTTGAATTTGAATTTATCGACTGA   1287


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