Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05707 and BL01166

See Amino acid alignment / Visit BSNT_05707 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:49
# Commandline: needle
#    -asequence dna-align/BSNT_05707___narK.1.5803.seq
#    -bsequence dna-align/BL01166___narK.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05707___narK-BL01166___narK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05707___narK-BL01166___narK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05707___narK
# 2: BL01166___narK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1236
# Identity:     805/1236 (65.1%)
# Similarity:   805/1236 (65.1%)
# Gaps:         159/1236 (12.9%)
# Score: 2640.5
# 
#
#=======================================

BSNT_05707___      0 --------------------------------------------------      0
                                                                       
BL01166___nar      1 ATGGCAAATCGTCAAAAAATACAATTACCGCTGCAGTCATTTAGTTTAGT     50

BSNT_05707___      1 ----------ATGGTTTGGGTGCTGATTTCATCACTCATTTCCCAAAT--     38
                               |||||||||||..|||||||.||     |||    |||  
BL01166___nar     51 CGCAGGATTTATGGTTTGGGTATTGATTTCCTC-----TTT----AATGC     91

BSNT_05707___     39 --CACATTAGATATTCATTTAAGCAAGG------------------GTGA     68
                       ||||            |||||| |||                  |.||
BL01166___nar     92 CCCACA------------TTAAGC-AGGACATCGCCCTGACAGACAGCGA    128

BSNT_05707___     69 GATTTCTTTAGTGACCGCGATTCCTGTGATCCTCGGGTCGCTTCTCCGCA    118
                     |.|.||..|.||.||.||.|||||.||.||.|||||||||||||||.|.|
BL01166___nar    129 GGTCTCCCTTGTTACGGCCATTCCGGTCATACTCGGGTCGCTTCTCAGGA    178

BSNT_05707___    119 TTCCTTTAGGGTATTTAACGAACAGGTTTGGCGCGCGGCTCATGTTTATG    168
                     ||||..|.||.||.|..||||||||.|||||.||..|..|.|..||.|||
BL01166___nar    179 TTCCGCTGGGCTACTACACGAACAGATTTGGAGCAAGAATTACATTCATG    228

BSNT_05707___    169 GTCAGCTTCATCCTGCTTTTATTTCCTGTATTTTGGATCAGTATCGCGGA    218
                     .|||||||..|.||||||.|.||.||.||.|||||||||||.|..||.||
BL01166___nar    229 ATCAGCTTTTTGCTGCTTCTGTTCCCGGTTTTTTGGATCAGCACAGCCGA    278

BSNT_05707___    219 TTCTCTGTTTGATTTAATCGCAGGCGGCTTTTTCTTAGGGATCGGGGGAG    268
                     |||.|||||.||.||.|||...||||||||.|||.|.||.|||||.||||
BL01166___nar    279 TTCGCTGTTCGACTTGATCCTTGGCGGCTTCTTCCTCGGCATCGGCGGAG    328

BSNT_05707___    269 CGGTGTTTTCCATTGGAGTGACCTCCCTCCCGAAATATTATCCGAAAGAA    318
                     ||||.||||||||.||.||.||.||.||.||||||||.||.||.||||||
BL01166___nar    329 CGGTCTTTTCCATCGGGGTCACATCACTGCCGAAATACTACCCTAAAGAA    378

BSNT_05707___    319 AAGCACGGTGTCGTCAATGGGATTTACGGTGCAGGAAATATCGGGACAGC    368
                     ||||||||..|.|||||||||||.|||||.||.||.||..||||.|||||
BL01166___nar    379 AAGCACGGGTTTGTCAATGGGATCTACGGCGCTGGGAACGTCGGTACAGC    428

BSNT_05707___    369 CGTTACGACATTTGCAGCGCCGGTTATCGCTCAAGCCGTCGGGTGG--AA    416
                     ..||||.||.|||||.||.||.|||.||||..||.|||.|||||||  ||
BL01166___nar    429 GATTACTACGTTTGCCGCTCCTGTTGTCGCAAAAACCGCCGGGTGGGAAA    478

BSNT_05707___    417 ATCAACCGTGCAGATGTATCTGATTTTGCTGGCTGTCTTTGCCTTACTGC    466
                     ||  ||.||||.||||||..|..|.||..|.||.||.||.||.|||.||.
BL01166___nar    479 AT--ACGGTGCGGATGTACATCGTGTTAGTCGCCGTATTCGCTTTATTGA    526

BSNT_05707___    467 ACGTGTTGTTTGGCGACAGGCAT-GAGAAGAAGGTCAAA-------GTTT    508
                     ||.|..|..||||.|      || ||.|||||  .||||       ||.|
BL01166___nar    527 ACTTTATCCTTGGAG------ATCGAAAAGAA--ACAAAAGTTACGGTAT    568

BSNT_05707___    509 CTGTTA-AGACTCAAATCAAAGCCGTTTACCGAAAT----CATGTGCTAT    553
                     ||||.| ||| .|||||.||.||.||.|||||||||    |||    |||
BL01166___nar    569 CTGTAACAGA-GCAAATGAAGGCAGTCTACCGAAATCAGACAT----TAT    613

BSNT_05707___    554 GGTTTCTGAGCCTGTTTTATTTTATTACGTTCGGTGCCTTTGTCGCCTTC    603
                     |||||.|.|||.|||||||.||.|||||.|||||..|.||.|||||.||.
BL01166___nar    614 GGTTTTTAAGCTTGTTTTACTTCATTACATTCGGATCTTTCGTCGCGTTT    663

BSNT_05707___    604 ACTATCTATCTGCCGAACTTTCTGGTGGAGCATTTTGGGCTGAATCCTGC    653
                     ||.||.|||||.|||||||||||.||..|.||.||.|||||..||||.|.
BL01166___nar    664 ACGATTTATCTTCCGAACTTTCTTGTTAATCACTTCGGGCTTGATCCCGT    713

BSNT_05707___    654 AGATGCCGGCTTGCGGACGGCTGGCTTTATTGCGGTTTCTACGCTGCTCA    703
                     .|||.|.||..||.|.||.||.||.|||||.||.||..|.||..|.||.|
BL01166___nar    714 CGATTCAGGGCTGAGAACCGCCGGATTTATCGCTGTCGCCACTTTTCTGA    763

BSNT_05707___    704 GGCCTGCAGGCGGATTCCTGGCTGATAAAATGAGCCCGCTCCGCA--TCT    751
                     ||||||..|||||.|..|||||.||.|||.|.|.||||||  |.|  |.|
BL01166___nar    764 GGCCTGTCGGCGGCTGGCTGGCAGACAAATTCAACCCGCT--GAAGCTGT    811

BSNT_05707___    752 TGATGTTTGTTTTTGCCGG--GCTTACATTATCAGGCATTATCCTATCAT    799
                     ||||||.|||.||||||||  ||  ||.||.|||||.|||.|..|..|.|
BL01166___nar    812 TGATGTATGTATTTGCCGGCTGC--ACCTTGTCAGGGATTTTATTGGCCT    859

BSNT_05707___    800 TCTCGCCGACAATCGGCCTTTATACGTTTGGATCATTAACCGTGGCTGTC    849
                     |.|||||||...||||.||.||...||||||...|||||||||.||.||.
BL01166___nar    860 TTTCGCCGAGCCTCGGACTGTACGGGTTTGGGGTATTAACCGTTGCCGTG    909

BSNT_05707___    850 TGCTCAGGCATAGGAAACGGGACTGTTTTTAAACTGGTGCCTTTCTATTT    899
                     |||.|.||..|.||||||||||...|.|||||.||.|||||..|.|||||
BL01166___nar    910 TGCGCCGGACTCGGAAACGGGATCATCTTTAAGCTCGTGCCGCTTTATTT    959

BSNT_05707___    900 TTCCAAGCAAGCGGGGATTGCCAATGGGATTGTGTCTGCCATGGGCGGAT    949
                     |||.||.||.||.||.||.|..||||||||.||.||.||.||||||||.|
BL01166___nar    960 TTCAAATCAGGCCGGCATCGTTAATGGGATCGTATCAGCGATGGGCGGCT   1009

BSNT_05707___    950 TAGGCGGCTTTTTTCCTCCGCTCATATTGGCGAGTGTATTTCAGGCAACA    999
                     |.||.||.|||||.||.||.|||||..||.|.||.||.|||||||||||.
BL01166___nar   1010 TGGGAGGATTTTTCCCGCCTCTCATCCTGTCAAGCGTTTTTCAGGCAACC   1059

BSNT_05707___   1000 GGCCAGTACGCGATCGGGTTTATGGCGCTTTCAGAGGTGGCGTTAGCCAG   1049
                     |||||.||.||||||||.||.||||||||.|||||.|.|||..|.||.||
BL01166___nar   1060 GGCCATTATGCGATCGGATTCATGGCGCTGTCAGAAGCGGCTCTTGCAAG   1109

BSNT_05707___   1050 TTTTGTCCTTGTCATATGGATGTATTGGCAGGAA-AGAATGAAAACA---   1095
                     .|||||..|.||..|.||||||||||..|||||| .||| .||||||   
BL01166___nar   1110 CTTTGTGATCGTGGTCTGGATGTATTTTCAGGAAGTGAA-CAAAACATCG   1158

BSNT_05707___   1096 ---CACACGGAGAGAAACAGCCAGAGCATCAACTAA   1128
                        .|.|||.||       |||| |.|||..| |||
BL01166___nar   1159 TCCAAAACGAAG-------GCCA-ACCATTTA-TAA   1185


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