Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05694 and BL01175
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:48
# Commandline: needle
# -asequence dna-align/BSNT_05694___narI.1.5803.seq
# -bsequence dna-align/BL01175___narI.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05694___narI-BL01175___narI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05694___narI-BL01175___narI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05694___narI
# 2: BL01175___narI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 704
# Identity: 495/704 (70.3%)
# Similarity: 495/704 (70.3%)
# Gaps: 49/704 ( 7.0%)
# Score: 1663.5
#
#
#=======================================
BSNT_05694___ 1 ATGAGCGGGCAGATCCTCTGGGGTATTATGCCATACATTGTATTGACAAT 50
||||.||..||.||.||.||||..||..|.||.||||||||..|.||.||
BL01175___nar 1 ATGATCGAACAAATACTGTGGGTCATCCTCCCCTACATTGTCATCACCAT 50
BSNT_05694___ 51 CTTTATCGGCGGCCATATTTACCGCTACCAGCATGACCAATTTGGCTGGA 100
.||||||||.||.||||||||||||||.||.|||||.|||||||||||||
BL01175___nar 51 TTTTATCGGAGGGCATATTTACCGCTATCAACATGATCAATTTGGCTGGA 100
BSNT_05694___ 101 CGGCGAAATCAAGCGAGATGTTAGAAAAGAAAAAACTCACCGCG---GGC 147
||||.|||||.|||||||||.|.|||||||||||||| .||| |||
BL01175___nar 101 CGGCCAAATCTAGCGAGATGCTCGAAAAGAAAAAACT---TGCGCTTGGC 147
BSNT_05694___ 148 AGCACACTTTTTCACTGGGGACTGCTGTGCGTTGTCGGCGGGCATGTCAT 197
||||..|||||.|||||||||.|..|.|..||..|||||||.|||||.||
BL01175___nar 148 AGCAGCCTTTTCCACTGGGGAATCTTTTTTGTCATCGGCGGACATGTGAT 197
BSNT_05694___ 198 GGGGATTCTGATCCCGGAAGGCGTGTATGCTTCCCTTGGCATTTCAGAGC 247
|||.|||.|.||.||||||.||.|.||||...|.||.|||.|||||||||
BL01175___nar 198 GGGAATTTTAATTCCGGAAAGCCTTTATGAGGCGCTCGGCGTTTCAGAGC 247
BSNT_05694___ 248 ATATGTATCACAAAATGGCGATTGGCGCTGGCTTGCCGGCGGGCATTGCG 297
|||||||.||.||.||.|||||.|||...||..||||.||.|||||.||.
BL01175___nar 248 ATATGTACCATAAGATCGCGATCGGCTTCGGACTGCCTGCAGGCATCGCC 297
BSNT_05694___ 298 GC-ATGTACCGGACTTGTCATCCTGACGTACAGAAGGCTGTTT----GAC 342
|| .||| |.||.|||.||||..||||.||| .||.|.|| |||
BL01175___nar 298 GCGCTGT-CAGGGCTTCTCATATTGACCTAC----CGCCGATTCACGGAC 342
BSNT_05694___ 343 AAAAGGATCCGCAAAACCAGCTC-GCCATCAGATATCCTTACGCTGCTCC 391
|||.||||.||.|||||.||||| |||..| |||.|..|.||.||..||
BL01175___nar 343 AAACGGATTCGAAAAACGAGCTCTGCCGGC-GATTTAATCACCCTTGTC- 390
BSNT_05694___ 392 TGC--TGCTGTTCATGATG----CTGTCAGGCGTTGCGGCCACGTTTCTC 435
|| ||.|.|||.||||| ||| ||| |||||||.||.||..|.
BL01175___nar 391 -GCTTTGTTATTCGTGATGACCACTG---GGC-TTGCGGCAACCTTCTTA 435
BSNT_05694___ 436 AATATTGATTCGAAAGGATTTGATTACCGGACCACAGTCGGGCCCTGGTT 485
||.||.|||||.||||||||.||.|||.||||.|||.||||.||.|||||
BL01175___nar 436 AACATCGATTCAAAAGGATTCGACTACAGGACAACAATCGGCCCGTGGTT 485
BSNT_05694___ 486 CAGGGAAATCGTTTTGTTCAGGCCTGACGCC--TCTTTGATGGAGAGTGT 533
..|..|.||..|.||.||||.|||.||.||| .||| ||||.|||.||
BL01175___nar 486 TCGCAACATTTTCTTATTCAAGCCGGATGCCGGGCTT--ATGGCGAGCGT 533
BSNT_05694___ 534 CCCGCTATGGTTTAAGTTTCATATTGTAATAGGATACGTCGTTTTTATCC 583
.||.||.|||||||||.||||.||..|.||.||.||||||.||||.|||.
BL01175___nar 534 GCCCCTCTGGTTTAAGCTTCACATCATCATGGGCTACGTCATTTTCATCG 583
BSNT_05694___ 584 TGTGGCCGTTTACGAGATTGGTTCATGTGTTCAGTCTGCCGCTCAAGTAT 633
|.||||||||.||..|..|.||.||.||.|||||..|||||||.||.|||
BL01175___nar 584 TCTGGCCGTTCACTCGGCTCGTCCACGTATTCAGCATGCCGCTAAAATAT 633
BSNT_05694___ 634 CTGACCCGCAGCTACGTTGTATATCGGAAACG-----CTCGTGA------ 672
.||||..|.|||||.|||||.||.|||||||| |.||..|
BL01175___nar 634 TTGACAAGAAGCTATGTTGTTTACCGGAAACGGGCGCCCCGCAAAAGCAT 683
BSNT_05694___ 672 ---- 672
BL01175___nar 684 GTAA 687
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