Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02994 and BL01185
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:41
# Commandline: needle
# -asequence dna-align/BSNT_02994___parC.1.5803.seq
# -bsequence dna-align/BL01185___parC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02994___parC-BL01185___parC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02994___parC-BL01185___parC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02994___parC
# 2: BL01185___parC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2486
# Identity: 1834/2486 (73.8%)
# Similarity: 1834/2486 (73.8%)
# Gaps: 127/2486 ( 5.1%)
# Score: 6650.5
#
#
#=======================================
BSNT_02994___ 1 TTGTCACAGCCAGA-ATTATTTCATGATTTACCATTAGAAGAGGTGATCG 49
.||.|||||||||| ||| |.|||||||||||||||.|||||.|||||||
BL01185___par 1 ATGGCACAGCCAGAGATT-TATCATGATTTACCATTGGAAGACGTGATCG 49
BSNT_02994___ 50 GCGACCGTTTTGGACGCTACAGTAAATATATTATTCAAGACAGGGCGCTG 99
||||||||||.||.||.|||||.||||||||||||||.|||.|||||||.
BL01185___par 50 GCGACCGTTTCGGCCGATACAGCAAATATATTATTCAGGACCGGGCGCTC 99
BSNT_02994___ 100 CCCGATGCAAGAGACGGATTAAAGCCGGTACAGCGCAGAATTCTGTATGC 149
||.|||||..|.|||||..|.|||||.||.||..|.|||||..|.||.||
BL01185___par 100 CCTGATGCGCGCGACGGCCTGAAGCCTGTTCAAAGAAGAATCTTATACGC 149
BSNT_02994___ 150 GATGCATACAGATGGAAACACGTTTGATAAAAACTTCAGAAAAGCGGCCA 199
.||||||.|.||.||.|||||.|..|||||.||.|||.|.||.||.||.|
BL01185___par 150 CATGCATGCGGAAGGGAACACATACGATAAGAATTTCCGCAAGGCCGCAA 199
BSNT_02994___ 200 AAACGGTCGGTAACGTCATCGGTAACTATCATCCGCACGGTGACAGCTCG 249
|||||||||||||.||.|||||.|||||||||||.|||||.|||||||||
BL01185___par 200 AAACGGTCGGTAATGTAATCGGAAACTATCATCCTCACGGAGACAGCTCG 249
BSNT_02994___ 250 GTTTATGAAGCAATGGTGCGGATGAGCCAGGATTGGAAAGTTCGTAATGT 299
||.||.|||||.||||||||||||||||||||.|||||.|||||.||.||
BL01185___par 250 GTCTACGAAGCGATGGTGCGGATGAGCCAGGACTGGAAGGTTCGCAACGT 299
BSNT_02994___ 300 GTTAATCGAAATGCATGGAAACAATGGAAGCATCGACGGAGATCCCCCGG 349
|.|.||.||||||||.||||||||.||||||||||||||.|||||.||||
BL01185___par 300 GCTGATTGAAATGCACGGAAACAACGGAAGCATCGACGGTGATCCGCCGG 349
BSNT_02994___ 350 CAGCCATGCGTTATACAGAGGCACGATTATCTC----CGATTGCATCTGA 395
|.||.||||||||||||||.|||.| .||| ||||.||.||.||
BL01185___par 350 CTGCGATGCGTTATACAGAAGCAAG----GCTCGCGGCGATCGCGTCAGA 395
BSNT_02994___ 396 GCTTCTTCGGGATATTGACAAAAACACGGTTGAATTTGTGCCGAACTTCG 445
|||..|.|||||||||||||||.|.|||||.||.|||||.||.|||||.|
BL01185___par 396 GCTATTGCGGGATATTGACAAAGAAACGGTCGAGTTTGTACCAAACTTTG 445
BSNT_02994___ 446 ATGATACAAGCAAGGAGCCTGTCGTACTCCCGGCGATGTTTCCTAACCTA 495
|||||||.|||||.|||||||||||.||.|||||.|||||.||.|||||.
BL01185___par 446 ATGATACGAGCAAAGAGCCTGTCGTCCTTCCGGCAATGTTCCCGAACCTG 495
BSNT_02994___ 496 TTGGTCAACGGATCTACCGGGATTTCAGCAGGATACGCGACCGACATTCC 545
.|.|||||||||||.||.||||||||.||.||.||.|||||.||||||||
BL01185___par 496 CTTGTCAACGGATCGACAGGGATTTCCGCCGGGTATGCGACTGACATTCC 545
BSNT_02994___ 546 CCCTCATCATCTGGGAGAAGTCATTGATGCTGTCATTAAGCGTAT----T 591
.||.||||||||.||.|||||.||.|||||.||.||||||||.|| |
BL01185___par 546 GCCGCATCATCTCGGGGAAGTGATCGATGCCGTGATTAAGCGGATCGACT 595
BSNT_02994___ 592 C----AAATGCCTTCTTGCTCTGTTGACGAACTCATGGAAGTT-ATTAAA 636
| ||.||| .|| ||.||.||.||||||| |||| .|.|||
BL01185___par 596 CGCCGAACTGC-----AGC---GTGGATGACCTCATGG-AGTTCGTAAAA 636
BSNT_02994___ 637 GGGCCTGATTTTCCGACAGGCGGTATTATTCAGGGCGTTGACGGGATAAG 686
||.||.||.||||||||.||.||.||.||.|||||....||.||.||||.
BL01185___par 637 GGTCCGGACTTTCCGACCGGAGGAATCATCCAGGGGAAAGAAGGCATAAA 686
BSNT_02994___ 687 AAAAGCTTACGAAACCGGAAAAGGAAAAATCATTATCCGCGGAAAGGCTG 736
||||||.||.|||||||||||||||||||||||.|||.|.||.||.||.|
BL01185___par 687 AAAAGCCTATGAAACCGGAAAAGGAAAAATCATCATCAGGGGCAAAGCCG 736
BSNT_02994___ 737 AAATTGAAACAATCAGAGGCGGACGAGAACAAATTGTCATTACTGAAATT 786
|.||.|||||||||||||||||.||..|.|||||||||||||||||||||
BL01185___par 737 AGATCGAAACAATCAGAGGCGGCCGCCAGCAAATTGTCATTACTGAAATT 786
BSNT_02994___ 787 CCATTTGAAGTAAATAAAGCAAACCTTGTAAAAAAAATGGACGAGTTCCG 836
||.||||||||.||.|||||.||..|.||.||||||||||||||.|||.|
BL01185___par 787 CCGTTTGAAGTCAACAAAGCGAATTTAGTGAAAAAAATGGACGAATTCAG 836
BSNT_02994___ 837 TATTGATAAAAAGGTTGAAGGCATCTCAGAGGTTCGTGATGAAACGGATC 886
.|||||....|||||.|||||.||.|||||.||.|||||.||.||.||.|
BL01185___par 837 GATTGAACGGAAGGTCGAAGGGATTTCAGAAGTCCGTGACGAGACCGACC 886
BSNT_02994___ 887 GAACAGGGCTGAGAGTGGTCATTGAACTGAAAAAAGAAGCTGATGCCAAA 936
|.|||||.||.|||.|.||.|||||.||||||||||||||.|||||..||
BL01185___par 887 GGACAGGCCTCAGAATCGTGATTGAGCTGAAAAAAGAAGCGGATGCACAA 936
BSNT_02994___ 937 GGTATTTTGAATTTCTTATACAAAAATACTGATTTGCAGATCACATATAA 986
||.|||||.|||||||||||||||||.||.|||||||||||..|.||.||
BL01185___par 937 GGCATTTTAAATTTCTTATACAAAAACACGGATTTGCAGATTCCTTACAA 986
BSNT_02994___ 987 CTTCAATATGGTAGCTATCCATAACCGCCGTCCGATGCTGATGAGCTTGC 1036
|||.||.|||||.||.|||||||||.|..|.|||||||||||||...|..
BL01185___par 987 CTTTAACATGGTCGCCATCCATAACAGAAGACCGATGCTGATGAATCTCA 1036
BSNT_02994___ 1037 CGTCTATTTTGGATGCATATATCGGACACCAAAAGGAAGTTGTCACAAAT 1086
|.||.||||||||.||.||||||||.||||||||.|||||..||||.||
BL01185___par 1037 CATCGATTTTGGACGCTTATATCGGCCACCAAAAAGAAGTCATCACCAA- 1085
BSNT_02994___ 1087 CGGTCCGTT-----TATGAGCTTCAAAAAGCAAAAGACAGACATCATATC 1131
||||| ||||||||..|||||||.||.||.||.|||||||||
BL01185___par 1086 ----CCGTTCTCAGTATGAGCTGAAAAAAGCGAAGGAAAGGCATCATATC 1131
BSNT_02994___ 1132 GTAGAAGGGCTCATGAAAGCTTTGTCTATTTTAGATGAAGTGATTGCAAC 1181
||||||||..|.|||||.||..||||.|||||.|||||.||.|||||.||
BL01185___par 1132 GTAGAAGGCTTAATGAAGGCACTGTCCATTTTGGATGAGGTCATTGCGAC 1181
BSNT_02994___ 1182 AATCCGTTCTTCTAGCGATAAACGTGACGCTAAAAACAATTTGATCGCGA 1231
.|||||.||.||.|..||.||.||.||.||.|||||||||.||||||..|
BL01185___par 1182 GATCCGCTCCTCCAATGACAAGCGCGATGCCAAAAACAATCTGATCGAAA 1231
BSNT_02994___ 1232 AATATGAATTTACGGAGCCTCAGGCTGAAGCCATCGTGTCATTGCAGCTA 1281
|.|..|.||||||.|||||.|||||||||||.|||||.||.||||||||.
BL01185___par 1232 AGTTCGCATTTACTGAGCCGCAGGCTGAAGCGATCGTTTCCTTGCAGCTG 1281
BSNT_02994___ 1282 TATCGTTTAACCAATACAGATATTACAGCGCTTAAGGAAGAGGCAGAAGA 1331
||..|..|.||.||.|||||||||||.||.||..|||||||.|||.||||
BL01185___par 1282 TACAGGCTGACAAACACAGATATTACGGCCCTCCAGGAAGAAGCAAAAGA 1331
BSNT_02994___ 1332 GCTCGGTAAAAAAATTGAAGAGCTCGA----ATCTATTCTGAGCAATGAT 1377
.||.|...|.||.||..|||||||.|| |||..||| |||||||
BL01185___par 1332 ACTGGACCAGAAGATCAAAGAGCTGGAAGAGATCCTTTC----CAATGAT 1377
BSNT_02994___ 1378 AAAAAACTGCTAAAAGTGATTACAAACAGCTT--AAAAGCACTGAAAAAG 1425
||.|||||..|.||||||||.|.|.||||||| ||||| .|.|||||.
BL01185___par 1378 AAGAAACTTTTGAAAGTGATCAAAGACAGCTTGAAAAAG--GTTAAAAAA 1425
BSNT_02994___ 1426 AAATATG-CAGATACGAGACGCTCCGTGATTGAAGAAAAAATTGAAGAAA 1474
|..|||| ||| |...||.|||||.||.||.|||||||||||.|||||||
BL01185___par 1426 ACCTATGCCAG-TCAAAGGCGCTCTGTCATCGAAGAAAAAATCGAAGAAA 1474
BSNT_02994___ 1475 TTAAAATCAATCTCGAAGTCATGGTTGCATCTGAGGATGTATATGTAACC 1524
||||||||||.||.|||||.|||||.||.||.||.||.||.|||||.|||
BL01185___par 1475 TTAAAATCAACCTTGAAGTGATGGTGGCGTCGGAAGACGTTTATGTGACC 1524
BSNT_02994___ 1525 GTTACGAAGGATGGTTACCTAAAACGGACGAGCCAGCGCTCATTTGCCGC 1574
||.|||||.||.|||||..|.|||||.|||||||||||.||.||.|||||
BL01185___par 1525 GTAACGAAAGACGGTTATATTAAACGAACGAGCCAGCGGTCTTTCGCCGC 1574
BSNT_02994___ 1575 TTCCAACGGACAGGACTTCGGAATGAAAGATACGGACAGGATGCTGCATC 1624
.||.|||||.|||||||||||.|||||||||||.|||.|..||||...||
BL01185___par 1575 ATCAAACGGCCAGGACTTCGGCATGAAAGATACCGACCGTCTGCTCTGTC 1624
BSNT_02994___ 1625 AGTTTGAAATGAATACGACAGACGTGCTGCTGCTCTTTACGAACAAAGGA 1674
||.|.||||||||||||||||||||.|||||..|.||.||.||.|||||.
BL01185___par 1625 AGCTGGAAATGAATACGACAGACGTTCTGCTCTTGTTCACAAATAAAGGG 1674
BSNT_02994___ 1675 AGCTACATCTATTGTCCTGTTCACCAGCTGCCTGATATCAGATGGAAGGA 1724
|||||..||||||||||.|||||||||||.|||||||||||||||||.||
BL01185___par 1675 AGCTATGTCTATTGTCCAGTTCACCAGCTCCCTGATATCAGATGGAAAGA 1724
BSNT_02994___ 1725 CATGGGCCAGCATTTTTCAAATCTGATCACTATTGACCGTGATGAAACGA 1774
..|.||.||||||.|..|.|||.|.||..|.||||||.|.|||||..|.|
BL01185___par 1725 TTTAGGTCAGCATATAACGAATATCATATCGATTGACAGCGATGAGTCCA 1774
BSNT_02994___ 1775 TTGTAAAGGCCATACCGATAAAAGAATTTGATCCG--TCGGCATATCTTC 1822
|.||.|||||.||.||..|.|.|||.||| .||| ||.|.|||.||.|
BL01185___par 1775 TCGTCAAGGCGATTCCTGTCAGAGAGTTT--ACCGAATCTGAATACCTGC 1822
BSNT_02994___ 1823 TATTCTTTACGAAAAACGGGATGGTGAAAAAGACAGAGCTCACCCATTAT 1872
|.|||||||||||||||||.||||.|||||..||..||||.|..||.|||
BL01185___par 1823 TGTTCTTTACGAAAAACGGAATGGCGAAAAGAACTCAGCTGATGCAGTAT 1872
BSNT_02994___ 1873 AAAGCACAGCGTTATTCTAAGGCGCTTGTGGCCTTAAATCTGAAGGGTGA 1922
|||||||||||.|||||.||.||.||.||.|||.|.|||.|.||.||.||
BL01185___par 1873 AAAGCACAGCGCTATTCAAAAGCACTGGTTGCCCTTAATTTAAAAGGCGA 1922
BSNT_02994___ 1923 AGATGAACTGATTGATGTACATGTAACAAATGG--GGAAAGCCAGA--TC 1968
.||||||.||.|.|||||.|||||||| || ||||.|..||| |.
BL01185___par 1923 CGATGAAGTGGTCGATGTTCATGTAAC----GGACGGAACGAAAGATTTG 1968
BSNT_02994___ 1969 TTTATGGCCACTCACTTAGGGTACGGTCTATGGTTTGGAGAAGACGAAGT 2018
|||||.||.||.||.|..||.||||||||.|||||...||||||.|||||
BL01185___par 1969 TTTATTGCGACACATTCCGGCTACGGTCTGTGGTTCACAGAAGATGAAGT 2018
BSNT_02994___ 2019 GAATGTAGTTGGCGCACGTGCGGCAGGTGTCAAAGGGATTAACTTAAAAG 2068
.|..||.||.||||||.|.|||||.||||||||.||..|.||.||.||||
BL01185___par 2019 CAGCGTCGTCGGCGCAAGGGCGGCCGGTGTCAAGGGCGTCAATTTGAAAG 2068
BSNT_02994___ 2069 AGGATGACTTTGTTGTCTCCGGTGAGATCCTTCAGCAATCTGATTCAATT 2118
|.|..||||||||.|.|..|||..||.|..|..||.||...|| .
BL01185___par 2069 ACGGCGACTTTGTCGCCAGCGGACAGGTTTTAGAGGAAAAAGA------C 2112
BSNT_02994___ 2119 GT-CTTGT-----TCACACAGCGGGGAGCGGTAAAACGCATGAGTCTTTC 2162
|| ||||| |.||.|||||.|||.|..|.||.||.||||..|....
BL01185___par 2113 GTGCTTGTGCTCGTGACCCAGCGCGGATCTATTAAGCGGATGAACCGCAG 2162
BSNT_02994___ 2163 TGAGTTCGAGAAGACATCCCGCGCAAAACGCGGTGTCGTAATGCTAAGGG 2212
.||.||.||.||.||.||..|.||.|||||.||.||..|.|||||.||||
BL01185___par 2163 CGAATTTGAAAAAACGTCAAGGGCGAAACGAGGGGTTCTCATGCTGAGGG 2212
BSNT_02994___ 2213 AACTGAAAAAGAATCCTCACCGAGTTGTAGCACTGTTCGC---TTGCGGT 2259
|||||||.||.||.||||||||..|||..|..|||.|||| ||....|
BL01185___par 2213 AACTGAAGAAAAAACCTCACCGCATTGCCGGCCTGCTCGCATGTTCATAT 2262
BSNT_02994___ 2260 CTTGAACAGCGACTAATGGCA-----GAAACAGAAAAAGGC--GACAGAA 2302
|.|||.|| ||| || .||||.||||||||| .|||||.
BL01185___par 2263 CATGATCA------AAT--CACGCTTCAAACCGAAAAAGGCATCACAGAG 2304
BSNT_02994___ 2303 AAGAACTGCAGGCAAAAGAGTTGCGGACAA-----ACGACAGATACAGCA 2347
.||| |||..|..|||||..| ||| |.|||.|.|||||||
BL01185___par 2305 GAGA--TGCTTGTCAAAGAAAT-----CAAGCTTCATGACCGGTACAGCA 2347
BSNT_02994___ 2348 ATGGCTCTTTCTTTTTTGATGAAGAGGAATCAGGCAAGGTTACAGCTGTT 2397
|.||.||||||.|..|.||.|||||.|||.||||..|.||.||.|.|||.
BL01185___par 2348 ACGGTTCTTTCATCATCGACGAAGATGAAGCAGGGGAAGTAACGGATGTA 2397
BSNT_02994___ 2398 TGGCGCCTTCATACAG--AACAATAA---------- 2421
||| || ||| ||| ||.|
BL01185___par 2398 TGG-------AT-CAGCAAAC-ATGAGCTGGAGTGA 2424
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