Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02731 and BL01202

See Amino acid alignment / Visit BSNT_02731 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:29
# Commandline: needle
#    -asequence dna-align/BSNT_02731.1.5803.seq
#    -bsequence dna-align/BL01202___yitG.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02731-BL01202___yitG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02731-BL01202___yitG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02731
# 2: BL01202___yitG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1289
# Identity:     867/1289 (67.3%)
# Similarity:   867/1289 (67.3%)
# Gaps:         121/1289 ( 9.4%)
# Score: 2749.0
# 
#
#=======================================

BSNT_02731         1 ATGTTGAG-AGAGAAAAGTGGA-ATGAAAAATATTATTGCATTGTCTTCC     48
                        ||||| |||.||||  .|| |||||||..|||.||||..|||||||.
BL01202___yit      1 ---TTGAGCAGAAAAAA--AGACATGAAAAGCATTTTTGCGCTGTCTTCG     45

BSNT_02731        49 GTACCGCTTGTGATGACACTCGGGAACTCCATGCTGATTCCTGTTCTTCC     98
                     ||.|||||.||||||||.|||||.||.||.|||||||||||.|||.|.||
BL01202___yit     46 GTCCCGCTCGTGATGACGCTCGGCAATTCGATGCTGATTCCGGTTTTGCC     95

BSNT_02731        99 GATGATGGAGAAAAAGCTGTCTGTGA-------CTTCATTTCAAGTATCT    141
                     |.||||.||.|||||       .|.|       ||||.|||||.||.||.
BL01202___yit     96 GGTGATCGAAAAAAA-------ATTAAACATTTCTTCGTTTCAGGTGTCG    138

BSNT_02731       142 TTAATCATTACTGTATATTCAGTAGTAGCAATTATTTGCATTCCGATTGC    191
                     ||.|||||.||.||.||||||.|.||.||.|||.|.|||||.||||||.|
BL01202___yit    139 TTGATCATCACGGTTTATTCAATTGTGGCGATTGTATGCATCCCGATTAC    188

BSNT_02731       192 CGGATATTTGTCGGATCGTTTCGGGAGAAAAAAAATATTGCTTCCATGCC    241
                     |||.|||.|||||||.||.|||||.||||||||.||..||||.|||||||
BL01202___yit    189 CGGCTATATGTCGGACCGGTTCGGAAGAAAAAAGATCATGCTCCCATGCC    238

BSNT_02731       242 TCCTCATTGCAGGATTGGGGGGAGCCGTAGCTGCTTTTGCCTCGACCTAT    291
                     |.||.|||||.|||...||.|||||..||||.|.|||.||.||.||.|.|
BL01202___yit    239 TTCTGATTGCGGGAGCTGGAGGAGCGTTAGCAGGTTTGGCTTCAACTTTT    288

BSNT_02731       292 ATGAAAAATCCTTATGCTATGATCTTGGCGGGGCGGGTTCTTCAAGGCAT    341
                     .|.||..||||.|.|||.|||||.||.||.||.||.||.||||||||.||
BL01202___yit    289 TTCAATGATCCGTTTGCGATGATTTTAGCAGGTCGCGTCCTTCAAGGAAT    338

BSNT_02731       342 TGGTTCTGCAGGTGCCGCTCCGATTGTCATGCCGTTTATCGGCGACCTGT    391
                     .||.||.||.||.||.||.|||||.|||||||||||||||||||||.|||
BL01202___yit    339 CGGCTCAGCCGGCGCAGCGCCGATCGTCATGCCGTTTATCGGCGACTTGT    388

BSNT_02731       392 T-TAAAGGAGACGATGAAAAGGTCAGCGCGGGTCTTGGCGATATTGAAAC    440
                     | .|||    |.||||||.|..||||||||||.||.||.|||||.||.||
BL01202___yit    389 TCCAAA----ATGATGAAGAAATCAGCGCGGGACTCGGAGATATAGAGAC    434

BSNT_02731       441 CGCCAACACGTCAGGGAAGGTACTGAGTCCCATACTTGGAGCCTTACTGG    490
                     .||.||.||..|.||.||.|||.|.||.||.|||.|.||.||.||..|.|
BL01202___yit    435 GGCAAATACTGCCGGCAAAGTATTAAGCCCGATATTAGGGGCTTTTTTAG    484

BSNT_02731       491 CTTCTTGGTATTGGTTTGTACCATTTTGGTTTATTCCGTT--TTTCTGTT    538
                     |.||||||..|||||...|.||.|||||||||||.|||.|  |.|||.||
BL01202___yit    485 CATCTTGGGTTTGGTACATGCCGTTTTGGTTTATCCCGGTCGTGTCTCTT    534

BSNT_02731       539 TGATCAGCTTTTTGCTCGTATTGTTTTTGGTGGCCAAGCCTGAAG----A    584
                       ..|||||||||.|||||.||||||||.||..||||.|| ||||    |
BL01202___yit    535 --GCCAGCTTTTTTCTCGTCTTGTTTTTTGTTCCCAAACC-GAAGGACAA    581

BSNT_02731       585 AGATGAAGATGCGCCTGCTGTTTCTGAGTTTA------TT---AAGAGTG    625
                     ||||||.||...||...|         |||.|      ||   ||.||.|
BL01202___yit    582 AGATGATGAAAAGCAAAC---------GTTAAAAAACTTTGCAAAAAGCG    622

BSNT_02731       626 TGAAGAAAATTTTTAAACAGGATGGTCGCTGGCTTTATACGGTCTTCA--    673
                     |..||.|||||||.||||.|||.|||||.||||||      ||.|.||  
BL01202___yit    623 TACAGGAAATTTTCAAACGGGAAGGTCGGTGGCTT------GTTTCCACT    666

BSNT_02731       674 ----TTATCGGGTGTGTCATTATGTTTTTGTTATTTGGCGTATTATTTTA    719
                         |.|||||..|..|.|||||||||.|.|||||.||.||..|.||.||
BL01202___yit    667 TTTGTCATCGGCGGAATTATTATGTTTCTTTTATTCGGAGTGCTCTTCTA    716

BSNT_02731       720 TTTATCAGATACGCTGGAGAACAAGTATGCTATTGACGGAGTAGCTAAAG    769
                     ..|.||.|||||..|||||||.|||.||...||||||||..|.||.||||
BL01202___yit    717 CCTGTCGGATACTTTGGAGAAGAAGCATCAAATTGACGGGATTGCGAAAG    766

BSNT_02731       770 GCG-GATTACTGGCA--ATCCCAC----TTTTGTTTTTGTCAACCAGTTC    812
                     |.| |.|| ||  ||  ||.||.|    ||||.|||..||    ||||||
BL01202___yit    767 GAGCGCTT-CT--CAGCATTCCGCTGCTTTTTCTTTCCGT----CAGTTC    809

BSNT_02731       813 TTTTATAGCTGGCAAAAAGATCGGTAAAGATAAAGGCCGAATGAAATTTT    862
                     .|...|.||.||.||...||||||.||.|||||...|.||||||...|.|
BL01202___yit    810 CTACCTTGCCGGAAAGCTGATCGGAAACGATAAGATCAGAATGAGGATCT    859

BSNT_02731       863 GCGTTGTTACAGGAATGATTCTGTTAACCCTTTCGTTTATTGCC---TTG    909
                     ||||..|.|..||.|||||.|||.|..|..|.||||   |||||   |||
BL01202___yit    860 GCGTGCTGATCGGCATGATCCTGCTGGCTTTGTCGT---TTGCCGGTTTG    906

BSNT_02731       910 TGGTGGAACCACAGTTTTTATTTTTTATTTGTCTTTTTAAGCTTTGGCGG    959
                     ||||||||||||||.|||||....||||||.|.|||.|...|.|.|||||
BL01202___yit    907 TGGTGGAACCACAGCTTTTACCCGTTATTTTTGTTTATGTCCATCGGCGG    956

BSNT_02731       960 GATTGGGATTGGAATGGCTCTTCCTGCTTTAGATGCACTGATAACCGAAG   1009
                     .||.||.||.|||||.||.||.|||.||||.|||||.|||||.|||||.|
BL01202___yit    957 CATCGGCATCGGAATTGCGCTCCCTTCTTTGGATGCGCTGATTACCGAGG   1006

BSNT_02731      1010 GGATTGAAAGTGAACAATGCGGAACCATTTCCTCCTTCTACAATAGCATG   1059
                     |.|||||||..|||.|..||||.||.||.||.||.||.|||||.||||||
BL01202___yit   1007 GAATTGAAAAAGAAGAGCGCGGCACGATATCTTCGTTTTACAACAGCATG   1056

BSNT_02731      1060 CGCTTTATAGGAGTAGCTCTCGGTCCACCTGTTTTTGCTGCATTA--ATG   1107
                     .|.|||||.||.||.||.|||||.||.||.|||||.||  |..||  |||
BL01202___yit   1057 AGGTTTATCGGTGTTGCGCTCGGACCGCCGGTTTTCGC--CTATATGATG   1104

BSNT_02731      1108 TCTAATGCAAACTGGATTATTTTCATACTCTCGGCGTTT-TGCAGCATCG   1156
                     .|.|||||....|||.|.||||||||..|.|| ||.||| |||||..|.|
BL01202___yit   1105 ACAAATGCGGGGTGGCTGATTTTCATCGTATC-GCTTTTGTGCAGTTTAG   1153

BSNT_02731      1157 TTTCTTTA----TTTTTAGTGCTCTTTACTGTAGATGCTAAAAAAAGTGA   1202
                     .|.|..||    ||    |||||.||||.|.|.||..|.|||      ||
BL01202___yit   1154 CTGCACTAGCGCTT----GTGCTGTTTAATATTGACCCGAAA------GA   1193

BSNT_02731      1203 AGAAGAA---GAA-----AAAAACTTAGGGACGGTCTAG   1233
                     |||.|||   |||     |||        ||||||.|||
BL01202___yit   1194 AGACGAAAGTGAAGCGGCAAA--------GACGGTGTAG   1224


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