Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02715 and BL01213

See Amino acid alignment / Visit BSNT_02715 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:27
# Commandline: needle
#    -asequence dna-align/BSNT_02715___spoVFA.1.5803.seq
#    -bsequence dna-align/BL01213___spoVFA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02715___spoVFA-BL01213___spoVFA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02715___spoVFA-BL01213___spoVFA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02715___spoVFA
# 2: BL01213___spoVFA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 923
# Identity:     647/923 (70.1%)
# Similarity:   647/923 (70.1%)
# Gaps:          52/923 ( 5.6%)
# Score: 2132.5
# 
#
#=======================================

BSNT_02715___      1 ATGTTAACCGGATTGAAAATTGCAGTTATCGGCGGTGACGCAAGACAGCT     50
                     ||||||||||||||||..||||||.|.||||||||.||.|||||.|||||
BL01213___spo      1 ATGTTAACCGGATTGACGATTGCAATCATCGGCGGCGATGCAAGGCAGCT     50

BSNT_02715___     51 CGAAATTATAAGAAAGCTCACTGAACAGCAGGCTGACATCTATCTTGTCG    100
                     |||.||.||..|.|||||.||.||||||.|.||..|..|||.|.|..|||
BL01213___spo     51 CGAGATCATCCGCAAGCTGACGGAACAGGATGCAAAGGTCTTTTTAATCG    100

BSNT_02715___    101 GTTTTGACCAATTGGATCACGGTTTTACCGGGGC------AGTAAAATGC    144
                     |||||||.||..|.||||||||.||||||||.||      |.||||  ||
BL01213___spo    101 GTTTTGATCAGCTTGATCACGGGTTTACCGGAGCTACAAAACTAAA--GC    148

BSNT_02715___    145 AATATTG-ATGAAATTCCTTTTCAGCA-AATAGACAGCATCATTCTTCCA    192
                          || |.|||.||..|||| .||| ||||||||||||.|||||.||.
BL01213___spo    149 -----TGAACGAACTTGATTTT-GGCACAATAGACAGCATTATTCTGCCT    192

BSNT_02715___    193 GTATCCGCGACAAC------AGGAGAAGGTGTCGTATCAACTGTATTTTC    236
                     |||||.|..|||.|      |||| |.|||..||     |||||.|||||
BL01213___spo    193 GTATCGGGCACATCGATGGAAGGA-ACGGTTGCG-----ACTGTTTTTTC    236

BSNT_02715___    237 TAATGAAGAAGTTGTGTTAAAACAGGACCATCTCGACAGAAC---GCCTG    283
                     .||||||.||||.||||||||||||||.|||.|.||.|.|||   ||| |
BL01213___spo    237 CAATGAAAAAGTGGTGTTAAAACAGGAACATTTAGAAAAAACCAAGCC-G    285

BSNT_02715___    284 CACATTGTGTCATTTTCTCAGGCATTTCTAACGTCTATTTAGAAAACATT    333
                     |||  ||.|..||||..|||||.|||||.|||...||||||||...|||.
BL01213___spo    286 CAC--TGCGCGATTTATTCAGGGATTTCAAACCAATATTTAGACGGCATG    333

BSNT_02715___    334 GCAGCTCA----GGCAAAAAGAAAACTTGTTAAACTGTTTGAGCGGGATG    379
                     ||    ||    |||.||..|....|||.|.||.||.|||||..|.||.|
BL01213___spo    334 GC----CAAAGGGGCGAACCGTCGTCTTATCAAGCTCTTTGAAAGAGACG    379

BSNT_02715___    380 ACATTGCGATATACAACTCTATTCCGACTGTAGAAGGAACGATCATGCTG    429
                     |.||||||||.||||||||.||.||.||.||.|||||..|.||.|||.||
BL01213___spo    380 ATATTGCGATTTACAACTCGATACCTACAGTCGAAGGTGCCATTATGATG    429

BSNT_02715___    430 GCTATTCAGCACACGGATTATACGATACACGGATCACAGGTGGCCGTTCT    479
                     ||.||.|||||.||.||.|.||||||.|||||.||..|.||....|||||
BL01213___spo    430 GCCATACAGCATACAGACTTTACGATTCACGGCTCGAATGTAATGGTTCT    479

BSNT_02715___    480 CGGTCTGGGGCGCACCGGGATGACGATTGCCCGTACATTTGCCGCGCTCG    529
                     |||.||||||||.||.||.||||..||...|||.||.||..|.|||||||
BL01213___spo    480 CGGGCTGGGGCGGACGGGAATGAGCATCAGCCGGACGTTCTCGGCGCTCG    529

BSNT_02715___    530 GGGCGAATGTAAAAGTGGGGGCAAGAAGTTCAGCGCATCTGGCACGTATC    579
                     |.||....||||||||.||.||..|....||.||.||.||.||..|.|||
BL01213___spo    530 GCGCACGCGTAAAAGTCGGAGCTCGCGACTCCGCCCACCTCGCCAGAATC    579

BSNT_02715___    580 ACTGAAATGGGGCTCGTTCCTTTTCATACCGATGAGCTGAAAGAGCATGT    629
                     |..||.|||||.|||..||||||.||.||..|.||.||...|||||||||
BL01213___spo    580 ATGGAGATGGGCCTCACTCCTTTCCACACAAACGAACTTGCAGAGCATGT    629

BSNT_02715___    630 AAAAGATATAGATATTTGCATTAATACCATACCGAGTATGATTTTAAATC    679
                     ..||.||||.||.||.|||||.||||||||.||.||..|||||.|..|| 
BL01213___spo    630 TGAAAATATCGACATATGCATCAATACCATTCCAAGCCTGATTCTCGAT-    678

BSNT_02715___    680 AAAC-GGTACTTTCTAGCATGACACCAAAAACCTTAATATTGGATCTGGC    728
                     |||| .||.||.||..|.||||||||.|.|||.|||||..|.|||.|.||
BL01213___spo    679 AAACATGTCCTCTCACGAATGACACCCAGAACATTAATTCTCGATTTAGC    728

BSNT_02715___    729 CTCACGTCCCGGGGGAACGGATTTTAAATATGCCGAGAAACAAGGGATTA    778
                     ..|.||||||||.||.||.||||||.|.|.||||||.||.|||||.||||
BL01213___spo    729 AACCCGTCCCGGAGGCACAGATTTTGATTTTGCCGAAAAGCAAGGCATTA    778

BSNT_02715___    779 AAGCACTTCTTGCTCCCGGGCTTCCAGGGATTGTCGCTCCTAAAACAGCT    828
                     ||||.||.||||||||.||.|||||.|||||.|||||.||||||||.||.
BL01213___spo    779 AAGCGCTGCTTGCTCCAGGACTTCCCGGGATCGTCGCGCCTAAAACGGCG    828

BSNT_02715___    829 GGGCAAATCCTTGCAAACGTCTTGAGCAAGCTTTTGGCTGAAAT-ACAAG    877
                     ||.||.|||.||||.||.||.|||.||||.||||||.|||||.| |||| 
BL01213___spo    829 GGACAGATCATTGCCAATGTTTTGTGCAACCTTTTGTCTGAATTAACAA-    877

BSNT_02715___    878 CTG------AGGAGGGGAAATAA    894
                     |||      |||.|..|..||||
BL01213___spo    878 CTGACCGAAAGGGGCTGTCATAA    900


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