Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02705 and BL01223

See Amino acid alignment / Visit BSNT_02705 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:26
# Commandline: needle
#    -asequence dna-align/BSNT_02705___ylxP.1.5803.seq
#    -bsequence dna-align/BL01223___ylxP.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02705___ylxP-BL01223___ylxP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02705___ylxP-BL01223___ylxP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02705___ylxP
# 2: BL01223___ylxP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 286
# Identity:     226/286 (79.0%)
# Similarity:   226/286 (79.0%)
# Gaps:          14/286 ( 4.9%)
# Score: 920.0
# 
#
#=======================================

BSNT_02705___      1 GTGATCGGATTTGCGGAGTGTGAATGCATCATTTATGATGCAGGATCGCT     50
                     ||||||||.||.|..||.||.||||||||||||||.||||||..|||.||
BL01223___ylx      1 GTGATCGGTTTCGTTGAATGCGAATGCATCATTTACGATGCATCATCACT     50

BSNT_02705___     51 AAAAGAAAAGCGTGCCGTTCTGAAGCGGGTTTTAACCAGGGTTCAAAA--     98
                     .||.||||||||.||.||.|||||||||.|..|.||.||       ||  
BL01223___ylx     51 CAAGGAAAAGCGGGCGGTGCTGAAGCGGATCATCACAAG-------AATC     93

BSNT_02705___     99 -----CAAGTTCAATGTTTCGATTTCGGAGATTGGCTATCAGGACACCTG    143
                          |||||||||.|||||..||||.||.||||.||||||||||||.||
BL01223___ylx     94 CGCGCCAAGTTCAACGTTTCTGTTTCAGAAATTGACTATCAGGACACTTG    143

BSNT_02705___    144 GCAAAGAACCAGCTTCGGAATCGCCGCTGTTTCTTCCTCTCGCGTTCAAA    193
                     |||..|.||.|||||.||.||||||||.|||||||||||||||||.||||
BL01223___ylx    144 GCAGCGCACAAGCTTTGGTATCGCCGCCGTTTCTTCCTCTCGCGTGCAAA    193

BSNT_02705___    194 CAGAAAAAGAACTGCAACGCGTCCTAGCGTTTATCGATTCTTTTCCTGAA    243
                     |.||||||||.|||||.||.|||||.||.|||||.||.||||||||.|||
BL01223___ylx    194 CGGAAAAAGAGCTGCAGCGGGTCCTCGCCTTTATTGACTCTTTTCCGGAA    243

BSNT_02705___    244 ATTGAACGGACGATCACTAGGACAGAGTGGTTTTAA    279
                     |||||||||||||||||.||.|||||||||||||||
BL01223___ylx    244 ATTGAACGGACGATCACGAGAACAGAGTGGTTTTAA    279


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