Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02698 and BL01228
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:26
# Commandline: needle
# -asequence dna-align/BSNT_02698___ylxS.1.5803.seq
# -bsequence dna-align/BL01228___ylxS.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02698___ylxS-BL01228___ylxS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02698___ylxS-BL01228___ylxS.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02698___ylxS
# 2: BL01228___ylxS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 482
# Identity: 372/482 (77.2%)
# Similarity: 372/482 (77.2%)
# Gaps: 19/482 ( 3.9%)
# Score: 1420.0
#
#
#=======================================
BSNT_02698___ 1 ATGAGCAAAAAAGTGACTGACACCGTTCA-AGAAATGGCTCAGCCAATCG 49
|||||.||.|||||||..||.|||| ||| .|||||||..|||||.||..
BL01228___ylx 1 ATGAGTAACAAAGTGATCGATACCG-TCAGCGAAATGGTCCAGCCTATAC 49
BSNT_02698___ 50 TAGACAGCCTTCAGCTGGAACTCGTTGACATTGAATTTGTCAAAGAGGGC 99
||||||..||||||||.||.|||||||||||.|||||||||||.||.|||
BL01228___ylx 50 TAGACAATCTTCAGCTTGAGCTCGTTGACATCGAATTTGTCAAGGAAGGC 99
BSNT_02698___ 100 CAAAGCTGGTTCCTTCGCGTGTTTATTGATTCCGATGACGGTGTGGATAT 149
||.||||||||.||||||||||||||||||||.||||||||.||.||.||
BL01228___ylx 100 CAGAGCTGGTTTCTTCGCGTGTTTATTGATTCAGATGACGGCGTAGACAT 149
BSNT_02698___ 150 TGAGGAATGTGCCAAAGTAAGCGAAGCTTTAAGCGAAAAGCTTGATGAGG 199
.||||||||||||||.||.|||||||||.|.||.||||||||.|||||||
BL01228___ylx 150 CGAGGAATGTGCCAAGGTTAGCGAAGCTCTTAGTGAAAAGCTCGATGAGG 199
BSNT_02698___ 200 CAGACCCAATCAGCCAAAATTACTTTCTTGAAGTCTCATCTCCAGGAGCT 249
|.||.||.||||..|||||.||.|||||||||||.||.||.||.||||||
BL01228___ylx 200 CTGATCCGATCAAGCAAAACTATTTTCTTGAAGTATCGTCCCCGGGAGCT 249
BSNT_02698___ 250 GAGCGTCCGCTAAAGAAAAAAGCCGATTTCGAAAAATCACTAGGAAAAAA 299
|||.|.||..||||||||.|||||||||||...||..|.||.||||||||
BL01228___ylx 250 GAGAGGCCTTTAAAGAAAGAAGCCGATTTCATGAAGGCGCTCGGAAAAAA 299
BSNT_02698___ 300 CGTATACATTAAGACGTATGAGCCTATTGACGGCGTAAAAGTGTTTGAAG 349
||||||.|||||.|||||.||.||||||||.|||...||||.||||||||
BL01228___ylx 300 CGTATATATTAAAACGTACGAACCTATTGAAGGCAATAAAGAGTTTGAAG 349
BSNT_02698___ 350 GTGAACTGGCTGAATTTGATGGACAAACAGTGACAGTTGAGATCAC---- 395
|.||.||..|.|.||||||.||..|||..||| |||.||||
BL01228___ylx 350 GCGAGCTTTCCGCATTTGACGGTGAAAACGTG------GAGGTCACGGTG 393
BSNT_02698___ 396 --GATCAAAACAAGAAAGAAACGGATCAATATTCCGTATGA-AAAGATAG 442
|||||||||..|...||||..||||||||||||.||||| |||| |||
BL01228___ylx 394 ATGATCAAAACGCGCCGGAAAACGATCAATATTCCATATGACAAAG-TAG 442
BSNT_02698___ 443 CTAATGCAAGATTAGCTGTTACATTC---TAA 471
|.||.||.||..|.||||||.|.||| |||
BL01228___ylx 443 CCAAAGCGAGGCTGGCTGTTTCGTTCAATTAA 474
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