Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02671 and BL01255
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:22
# Commandline: needle
# -asequence dna-align/BSNT_02671___flhB.1.5803.seq
# -bsequence dna-align/BL01255___flhB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02671___flhB-BL01255___flhB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02671___flhB-BL01255___flhB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02671___flhB
# 2: BL01255___flhB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1137
# Identity: 782/1137 (68.8%)
# Similarity: 782/1137 (68.8%)
# Gaps: 111/1137 ( 9.8%)
# Score: 2557.0
#
#
#=======================================
BSNT_02671___ 1 ATGAAGCTTAGA-GTT-GACCTGCAGTTTTTTGCGGGAGAGAAGACAGAA 48
|||||||| || ||| ||..||||.|||||.||.||.||.||.||.|||
BL01255___flh 1 ATGAAGCT--GACGTTGGATTTGCAATTTTTCGCAGGTGAAAAAACGGAA 48
BSNT_02671___ 49 AAAGCAACTCCGAAAAAACGGAAGGATACGC-GAAAAAAAGGGCAGGTAG 97
|||||.||.||||||||||||..||| |.|| ||||||||||.|||||.|
BL01255___flh 49 AAAGCGACGCCGAAAAAACGGCGGGA-AAGCAGAAAAAAAGGTCAGGTTG 97
BSNT_02671___ 98 CCAAAAGCTCGGATGTCAATACCGCCGTTTCTTTAC------TGGTAATA 141
|||||||..|.|||||||||||.||.||..||.|.| ||.|..||
BL01255___flh 98 CCAAAAGTGCAGATGTCAATACGGCGGTCACTCTTCTCATCGTGTTTTTA 147
BSNT_02671___ 142 TTCCTTTCGCTTATTGCAATTGGTCCGTATATGAGAGACAGGCTGCT--G 189
|||||| ||||| .||.||.||.|.||||||||||.|.||||| |
BL01255___flh 148 -TCCTTT---TTATT--CATCGGACCTTTTATGAGAGACCGCCTGCTCGG 191
BSNT_02671___ 190 TCATTCATAGAAACATTTTATACCGAATCGCTCACAATGAAGCTCTCAG- 238
.| |.||.||||..|.|||.|..||||...||||.||||||.|.||||
BL01255___flh 192 CC--TGATCGAAAAGTATTACAAAGAATTAATCACGATGAAGGTGTCAGT 239
BSNT_02671___ 239 ----AA---------------TCAAATGTGCATACATTGTTTGTCAGCTT 269
|| ||||| ||| |||| ||||
BL01255___flh 240 CGCCAATATTCCCGGCCTGTTTCAAA-GTG----------TTGT--GCTT 276
BSNT_02671___ 270 ATTAAAGGATAT-GGGCATAATACTCGCACCGATTTTGCT------TGTT 312
|| || ||||.|.||..|.||||||.||||||| .||.
BL01255___flh 277 -------GA-ATCGGGCCTCATTATGGCACCGCTTTTGCTGACAGCCGTC 318
BSNT_02671___ 313 G-CTCTTGTTGCAGGAGTCGTAAGCAACTATATGCAGGTTGGGTTCTTAT 361
| |||| ||.||..|.||||||||||||||.||.|||||.||||
BL01255___flh 319 GTCTCT-------GGGGTATTGAGCAACTATATGCAAGTCGGGTTTTTAT 361
BSNT_02671___ 362 TTTCTGCTGAAGTGATACAGCCTAAGCTTGAAAAA-CTGGATCCGATCAA 410
||.|..||||||.|||..|||||.| .|||||||| ||.||.|||.|.||
BL01255___flh 362 TTGCCCCTGAAGCGATCAAGCCTGA-TTTGAAAAAGCTTGACCCGCTTAA 410
BSNT_02671___ 411 AGGCTTTAAACGAATATACAGTATGAGGGCGATTGTAGAGCTGATTAAAT 460
.||.||.||.||.||.|||||.||.||||||||.||.||.|||.||||||
BL01255___flh 411 TGGATTCAAGCGGATTTACAGCATCAGGGCGATCGTTGAACTGCTTAAAT 460
BSNT_02671___ 461 CAATTTTGAAAATCGTAGTCGTCGGTTTTGCGGCTTTTGCTGTGCTTTGG 510
|.|||||.||||||||..|.|||||....|.|.|.||.||.||..|.|||
BL01255___flh 461 CGATTTTAAAAATCGTGATTGTCGGAGGCGTGACATTCGCCGTTTTATGG 510
BSNT_02671___ 511 CTGCATTATGGAGAAATTCT-------CCGGCTTCCTCTC--CTGACACC 551
|||.|.|.||...||||||| ||||| .||.|| |||.|
BL01255___flh 511 CTGAACTTTGACAAAATTCTCAGAATCCCGGC--GCTGTCGGCTGGC--- 555
BSNT_02671___ 552 CGAAGAGGCACT---ATCTTTCGTTTCAAAACTCACTTTGTGGATGGGAC 598
|||||..| ||.|.|||..| ..|||||.||.|..|||||..
BL01255___flh 556 ----GAGGCTTTGTCATATGTCGGCT---GGCTCACCTTTTTAATGGGGG 598
BSNT_02671___ 599 TAAGCGGTGCAGGCGCTTTATTAATTCTTGCTGGT-CTTGACTATTTATA 647
|...||.|||||.|||.|||.|..||||.|| ||| ||.||.||..|.||
BL01255___flh 599 TTTCCGCTGCAGTCGCATTAATTTTTCTCGC-GGTGCTCGATTACCTCTA 647
BSNT_02671___ 648 TCAGAGATTTGATTATGAGAAAAACATCAAAATGTCAAAACAAGATATAA 697
|||.|.||||||.|||||.|||||.||....|||||||||||.||.||.|
BL01255___flh 648 TCAAAAATTTGACTATGAAAAAAATATTCGCATGTCAAAACAGGACATCA 697
BSNT_02671___ 698 AAGACGAGTACAAAAAATCTGAAGGTGACCCGATTATTAAGTCTAAAATT 747
|||||||.|||||||||.|.|||||.||.||..|.||.|||||.||.||.
BL01255___flh 698 AAGACGAATACAAAAAAACCGAAGGCGATCCTCTGATCAAGTCGAAGATC 747
BSNT_02671___ 748 AAACA-AAGACAGCGGGAAATGGCGATGAGGCGGATGATGCAGGAAGTTC 796
||.|| ||| ||...|||||||||||||.|.||.||||||||||||||.|
BL01255___flh 748 AAGCAGAAG-CAAAAGGAAATGGCGATGCGCCGCATGATGCAGGAAGTGC 796
BSNT_02671___ 797 CAAAAGCAGATGTCATTATCACAAACCCGACTCACTATGCGATTGCTTTG 846
|||||||.||||||||.||||||||||||||.||.||.||..|.||.|||
BL01255___flh 797 CAAAAGCGGATGTCATCATCACAAACCCGACCCATTACGCCGTCGCATTG 846
BSNT_02671___ 847 AAATATGATGAAGAAAAAATGGACGCTCCTTATATTGTTGCAAAAGGTGT 896
|||||.||.|||.|.||||||||.||.||.|.|||..|.||||||||.||
BL01255___flh 847 AAATACGACGAAAACAAAATGGATGCGCCGTTTATCATCGCAAAAGGGGT 896
BSNT_02671___ 897 CGACCACCTTGCGTTAAAAATCAGGAAAATTGCTAAAGAGCATGATGTCA 946
|||.|...|.||..|.|||||||||.|.||.||.|||||.||.|||||||
BL01255___flh 897 CGATCTAATGGCTCTGAAAATCAGGCAGATCGCCAAAGAACACGATGTCA 946
BSNT_02671___ 947 TGATGGTAGAAAACAGACCGCTTGCCCGTGCGTTATATGATCAGGTGGAA 996
|||.|||.||.|||||.||..|.||..|.|||.|.|||||.|||||.||.
BL01255___flh 947 TGACGGTCGAGAACAGGCCTTTGGCAAGGGCGCTCTATGACCAGGTTGAG 996
BSNT_02671___ 997 ATTGACCAGGCAGTGCCGGAAGAATTTTTTAAAGTTTTAGCAGAAATTCT 1046
||.||||||||.||.|||||||||||.|||||.|...||||.|||||.||
BL01255___flh 997 ATCGACCAGGCCGTTCCGGAAGAATTCTTTAAGGCCGTAGCCGAAATCCT 1046
BSNT_02671___ 1047 GGCTTACGTATATAAAACAAAACAAAAAGTATATTGA 1083
|||.||.||.||.||||||||.||||||.|.||.
BL01255___flh 1047 GGCCTATGTTTACAAAACAAAGCAAAAAATCTAG--- 1080
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