Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02664 and BL01260

See Amino acid alignment / Visit BSNT_02664 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:22
# Commandline: needle
#    -asequence dna-align/BSNT_02664___cheY.1.5803.seq
#    -bsequence dna-align/BL01260___cheY.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02664___cheY-BL01260___cheY.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02664___cheY-BL01260___cheY.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02664___cheY
# 2: BL01260___cheY
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 365
# Identity:     296/365 (81.1%)
# Similarity:   296/365 (81.1%)
# Gaps:           4/365 ( 1.1%)
# Score: 1189.5
# 
#
#=======================================

BSNT_02664___      1 ATGGC--ACATAGAATTTTAATTGTAGATGACGCAGCATTTATGAGAATG     48
                     |||||  ||| || ||||||.|.||.|||||.||||||||||||||||||
BL01260___che      1 ATGGCTTACA-AG-ATTTTAGTAGTTGATGATGCAGCATTTATGAGAATG     48

BSNT_02664___     49 ATGATTAAAGATATTTTGGTTAAAAATGGTTTTGAAGTTGTGGCGGAAGC     98
                     ||||||||||||||||||||.|||||.||.||||||||.||.||.|||||
BL01260___che     49 ATGATTAAAGATATTTTGGTGAAAAACGGCTTTGAAGTCGTCGCAGAAGC     98

BSNT_02664___     99 TGAAAATGGAGCACAAGCGGTAGAGAAATATAAAGAGCATTCACCTGACC    148
                     ..||.|.||.|||||.||.||.||.||.||||||||||||||||||||.|
BL01260___che     99 GCAAGACGGGGCACAGGCTGTTGAAAAGTATAAAGAGCATTCACCTGATC    148

BSNT_02664___    149 TTGTTACTATGGATATCACGATGCCAGAAATGGATGGTATTACAGCATTA    198
                     ||||.||.|||||||||||||||||.||||..||.||.||.||.||..|.
BL01260___che    149 TTGTCACAATGGATATCACGATGCCGGAAAAAGACGGAATCACGGCTCTT    198

BSNT_02664___    199 AAAGAAATTAAACAAATTGATGCGCAGGCAAGAATCATCATGTGTTCTGC    248
                     ||||||||.||..||||.|||.|||||||||.|||||||||||||||.||
BL01260___che    199 AAAGAAATCAAGGAAATCGATCCGCAGGCAAAAATCATCATGTGTTCGGC    248

BSNT_02664___    249 TATGGGACAGCAATCAATGGTTATTGATGCCATTCAGGCCGGCGCTAAGG    298
                     .|||||.||||||||.||||||||.||.|||||.|||||.||.||.||.|
BL01260___che    249 AATGGGCCAGCAATCGATGGTTATCGACGCCATCCAGGCGGGAGCGAAAG    298

BSNT_02664___    299 ATTTCATTGTGAAACCTTTCCAAGCTGACCGTGTGCTTGAAGCAATCAAC    348
                     |.||.||.||.|||||.|||||.||||||||.||..|.|||||.|||||.
BL01260___che    299 ACTTTATCGTCAAACCGTTCCAGGCTGACCGCGTCATGGAAGCCATCAAT    348

BSNT_02664___    349 AAAACATTAAGTTAA    363
                     |||||..||||.|||
BL01260___che    349 AAAACGCTAAGCTAA    363


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