Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02630 and BL01283

See Amino acid alignment / Visit BSNT_02630 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:19
# Commandline: needle
#    -asequence dna-align/BSNT_02630___smf.1.5803.seq
#    -bsequence dna-align/BL01283___smf.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02630___smf-BL01283___smf.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02630___smf-BL01283___smf.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02630___smf
# 2: BL01283___smf
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1002
# Identity:     589/1002 (58.8%)
# Similarity:   589/1002 (58.8%)
# Gaps:         207/1002 (20.7%)
# Score: 1553.0
# 
#
#=======================================

BSNT_02630___      1 --------------------TTGGATCAGGCCGCTGC-CTGCCTAACGAT     29
                                         ||.|||      ..||| |.|||      |
BL01283___smf      1 ATGAACGACAGCAGCGAGCTTTTGAT------ATTGCTCCGCC------T     38

BSNT_02630___     30 TTGCAGAATCAATCAATTATTATCCCCATCCCTTCTATTAAAATGGTGGA     79
                     |.||.|.| ||.||        |||||.||.||.||....||.|||||||
BL01283___smf     39 TCGCGGCA-CACTC--------TCCCCTTCTCTGCTGACCAAGTGGTGGA     79

BSNT_02630___     80 A--AGCCGATCCGTCTATGTCGCTGAC-----------ATCACCTGTGTT    116
                     |  ||  ||.||.||..||||.||.||           |.||.|| |.|.
BL01283___smf     80 AGCAG--GACCCTTCCTTGTCTCTTACGGGCGAAAAAAACCATCT-TTTA    126

BSNT_02630___    117 ACAAACGGTTACTCGTGATCAAATAAAAGCA-------GCTGCATTAAAA    159
                     ||.|| |.||     |.||.||| ||.|.||       |||.|||...||
BL01283___smf    127 ACGAA-GCTT-----TCATTAAA-AAGATCAGACTTGTGCTCCATACGAA    169

BSNT_02630___    160 AAC-----GAAATAGAAC-----AATTTTATCCAAA--GCTC--CCGCGT    195
                     |||     |||..|||||     |||.||    |||  ||||  ||    
BL01283___smf    170 AACTGGCGGAACAAGAACTGTCTAATGTT----AAACGGCTCATCC----    211

BSNT_02630___    196 GTACTT-----GCTGCTTATCGTGAGCAAG---GCATTAACACCATCCCT    237
                     ||.|||     ||.||    ||   ||  |   ||||.|.|.||      
BL01283___smf    212 GTTCTTACGAGGCGGC----CG---GC--GTCCGCATGACCGCC------    246

BSNT_02630___    238 ATTTCTTCAAAGC----AATATCCTTTCTGGCTTAAAAGCATTTATGATC    283
                     ||.|||||    |    |.|||||...|.|.||.||||.||||.||||.|
BL01283___smf    247 ATATCTTC----CCCTGATTATCCAGCCAGCCTGAAAACCATTCATGACC    292

BSNT_02630___    284 CCCCTGCCGTACTGTTTGCAAAAGGTGATATGACTCTTCTTTCGA--AAG    331
                     |.|||.||||.||.|||..||||||..|.|..|..||||  ||.|  ||.
BL01283___smf    293 CGCCTCCCGTCCTTTTTTTAAAAGGAAACAAAAAACTTC--TCCATGAAC    340

BSNT_02630___    332 GGAGAAAAATTGGAATTGTAGGGACAAGAAATCCAACAGCTTAT-GGGAA    380
                     ..|||...||.|||||.||.||.||..|....||..||  |||| .||||
BL01283___smf    341 AAAGACTGATCGGAATCGTCGGAACTCGCTGCCCGTCA--TTATACGGAA    388

BSNT_02630___    381 ACAAG--------------TTGTCAATCATC-TTACAAAAGAGATCTGTC    415
                     | |||              ||||||...|.| ||.||||           
BL01283___smf    389 A-AAGAGCTGCGGTCCAGCTTGTCAGGGAGCTTTGCAAA-----------    426

BSNT_02630___    416 GTAAAGGTTGGGTGATTGTCAGCGGACTGGCGTCTGGGATAGACGGAATG    465
                       ||..|.|||..|||.||||||||.||.||....||.||.|||||..|.
BL01283___smf    427 --AACAGCTGGACGATCGTCAGCGGTCTTGCAAAAGGAATTGACGGTCTC    474

BSNT_02630___    466 TCCCATGCTGCA-AGTA----TTAAGGCGAAGGGGCGGACAATTGGCGTC    510
                     .||||| |.|.| ||.|    ||    |.|||||..|||||||.|||||.
BL01283___smf    475 GCCCAT-CAGGAGAGCATCCGTT----CAAAGGGAAGGACAATCGGCGTT    519

BSNT_02630___    511 ATTGCAGGCGGATTTCAACA-CATTTATCCCCGAGAAAACCTTCAGTTAG    559
                     ||.||.|||||| ||||||| |||.||||||||.|||.|.|..|||.|.|
BL01283___smf    520 ATCGCGGGCGGA-TTCAACAGCATATATCCCCGTGAACATCGCCAGCTCG    568

BSNT_02630___    560 CAGATCACATGGCTAAACACCATATCCTGCTG---TCAGAGCACCCACCT    606
                     |.|..||.|||||..||..|||   |||||||   |||||||||||.|||
BL01283___smf    569 CCGGACAAATGGCCGAAAGCCA---CCTGCTGGTATCAGAGCACCCTCCT    615

BSNT_02630___    607 GAAACGAAACCCCAAAAATGGCATTTCCCTATGAGAAACCGTATTATCAG    656
                     .|.|..|||||.||||||||||||||.||.|||.||||.||..|.|||||
BL01283___smf    616 CACATTAAACCGCAAAAATGGCATTTTCCCATGCGAAATCGGCTGATCAG    665

BSNT_02630___    657 CGGACTAAGTGAAGGCGTTATTGTCGTTCAGGGCAAAGAAAAAAGCGGTT    706
                     ||||.|||..|||||..|..|||||||.||.|||||.|||||.|||||.|
BL01283___smf    666 CGGATTAACGGAAGGAATCGTTGTCGTCCAAGGCAAGGAAAAGAGCGGAT    715

BSNT_02630___    707 CGCTGATTACTGCCTATCAAGCATTGGAACAAGGGAGAGAGGTATTTGCC    756
                     ||||.|||||.||.||.|||||..|.||.||.|||.|.|||||.||.|||
BL01283___smf    716 CGCTCATTACAGCATACCAAGCCCTTGAGCAGGGGCGGGAGGTGTTCGCC    765

BSNT_02630___    757 GTACCCGGTTCATTGTTTG------ACCCTTACGCCGGAGGTCCTATAAA    800
                     ||.||.|||.|..|.||||      ||.|||.|      ||||||..||.
BL01283___smf    766 GTGCCGGGTCCGATCTTTGATGCCAACTCTTTC------GGTCCTTCAAG    809

BSNT_02630___    801 ACTGATCCAGCAGGGGGCTAAAGCCATATGGTCAGCA--GAGGATATTTT    848
                     .|||||||||.|.|||||.|||..|.|||  |.|..|  ||.||.|||||
BL01283___smf    810 GCTGATCCAGGAAGGGGCGAAACTCGTAT--TAACTATTGAAGACATTTT    857

BSNT_02630___    849 CGAGGAACTTCCTGAGAG-----AAACGTTCAATATACGGAACCCTTTTG    893
                     ..|.||||||||     |     |||||.|||||||||.| |.|||.||.
BL01283___smf    858 GAACGAACTTCC-----GCCTTCAAACGCTCAATATACAG-AGCCTGTTT    901

BSNT_02630___    894 A-    894
                     | 
BL01283___smf    902 AG    903


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