Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02629 and BL01284
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:19
# Commandline: needle
# -asequence dna-align/BSNT_02629___sucD.1.5803.seq
# -bsequence dna-align/BL01284___sucD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02629___sucD-BL01284___sucD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02629___sucD-BL01284___sucD.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02629___sucD
# 2: BL01284___sucD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 912
# Identity: 732/912 (80.3%)
# Similarity: 732/912 (80.3%)
# Gaps: 18/912 ( 2.0%)
# Score: 2955.5
#
#
#=======================================
BSNT_02629___ 1 ATGAGTGTTTTCATTAATAAAGATACAAGAGTTATTGTGCAAGGGATTAC 50
||||||||.||.|||||||||||.||||.|||.|||||.||.|||||.||
BL01284___suc 1 ATGAGTGTATTTATTAATAAAGACACAAAAGTCATTGTTCAGGGGATAAC 50
BSNT_02629___ 51 AGGTTCTACCGCTTTATTTCATACGAAGCAGATGCTTGAATACGGCACAA 100
.|||||.||||||||.|||||.||.||||||||||||||||||||.||.|
BL01284___suc 51 GGGTTCAACCGCTTTGTTTCACACAAAGCAGATGCTTGAATACGGAACGA 100
BSNT_02629___ 101 ATATCGTTGGCGGTGTAACACCTGGAAAAGGCGGAACAGAAGCGGAAGGT 150
|.||.||.|||||.||.|||||.||.||||||||||||||.|..|||||.
BL01284___suc 101 AAATTGTCGGCGGAGTCACACCGGGCAAAGGCGGAACAGAGGTCGAAGGG 150
BSNT_02629___ 151 GTTCCTGTATTTAATAC------AGTGGCTG--AAGCAGTTCAAACAACC 192
||.|||||.||.||||| ||.||||| |||||| |||
BL01284___suc 151 GTGCCTGTGTTCAATACGGTCGAAGAGGCTGTAAAGCAG--------ACC 192
BSNT_02629___ 193 GGCGCTAACGCGTCTGTTATATATGTGCCCGCACCGTTTGCAGCTGATGC 242
||.||.||.||||||||.||.||.||.||.||..|.|||||.||.|||||
BL01284___suc 193 GGGGCAAATGCGTCTGTCATTTACGTTCCTGCGGCTTTTGCGGCCGATGC 242
BSNT_02629___ 243 GATTATGGAAGCGGTAGATGCGGAGCTTGATCTCGTGATTTGTATCACAG 292
|||||||||||||..||||||.|||||||||||.||.||.||.||.||.|
BL01284___suc 243 GATTATGGAAGCGACAGATGCTGAGCTTGATCTTGTCATCTGCATTACTG 292
BSNT_02629___ 293 AACATATCCCGGTTTTGGATATGGTGAAGGTCAAACGCTTCATGGAAGGC 342
|.|||||.|||||..|.||||||||.||.||||||.|.|..|||||||||
BL01284___suc 293 AGCATATTCCGGTGCTTGATATGGTAAAAGTCAAAAGGTATATGGAAGGC 342
BSNT_02629___ 343 AAGAAAACGAGACTGATAGGGCCGAACTGTCCTGGTGTCATTACGCCTGA 392
||||||||||||||.||.||.||||||||.||.||.||||||||||||||
BL01284___suc 343 AAGAAAACGAGACTCATCGGTCCGAACTGCCCGGGAGTCATTACGCCTGA 392
BSNT_02629___ 393 AGAATGTAAAATCGGCATTATGCCCGGATACATCCATAAAAAGGGTCATG 442
.|||||.||||||||.||.|||||||||||.|||||||||||.||.||||
BL01284___suc 393 GGAATGCAAAATCGGGATCATGCCCGGATATATCCATAAAAAAGGCCATG 442
BSNT_02629___ 443 TAGGCGTTGTATCACGTTCAGGGACATTAACATACGAAGCGGTGCACCAG 492
|.||||||||.||.||||||||.||..|.|||||.||||||||.||.|||
BL01284___suc 443 TCGGCGTTGTGTCGCGTTCAGGAACCCTTACATATGAAGCGGTTCATCAG 492
BSNT_02629___ 493 CTCTCAGAAGCGGGTGTAGGGCAATCTACAGCTGTTGGAATCGGCGGCGA 542
||.||.|||||.||.||.||.||.||.|||||.||.||.||||||||.||
BL01284___suc 493 CTTTCCGAAGCAGGAGTCGGCCAGTCGACAGCAGTGGGCATCGGCGGAGA 542
BSNT_02629___ 543 CCCTGTAAATGGAACAAACTTTATTGACGTTTTAAAAGCGTTTAACGAAG 592
|||.||.||.||.||||||||.||.||.||..|.||.||.|||||.||||
BL01284___suc 543 CCCCGTCAACGGCACAAACTTCATCGATGTGCTGAAGGCTTTTAATGAAG 592
BSNT_02629___ 593 ATCCTGACACACACGCAGTCATCATGATTGGCGAAATCGGCGGTACGGCC 642
|||||||.|||||.||.||.||||||||.||||||||||||||.||.||.
BL01284___suc 593 ATCCTGATACACATGCGGTGATCATGATCGGCGAAATCGGCGGAACAGCT 642
BSNT_02629___ 643 GAAGAGGAAGCGGCAGAGTGGGTAAAAGCCAACATGACAAAACCGGTAGT 692
||||||||||||||.||.|||||.||||||||||||||.|||||.||.||
BL01284___suc 643 GAAGAGGAAGCGGCTGAATGGGTGAAAGCCAACATGACCAAACCTGTCGT 692
BSNT_02629___ 693 CGGTTTTATCGGCGGTAAAACAGCACCTCCTGGGAAGCGCATGGGGCATG 742
||||||.|||||.||.||.|||||.|||||.||.||||||||||||||||
BL01284___suc 693 CGGTTTCATCGGAGGAAAGACAGCGCCTCCGGGCAAGCGCATGGGGCATG 742
BSNT_02629___ 743 CAGGCGCCATTATTTCCGGCGGAAAAGGGACAGCTGATGAAAAAATCAAA 792
|.||||||||.||||||||.||||||||.||.||.||.|||||.||||||
BL01284___suc 743 CGGGCGCCATCATTTCCGGAGGAAAAGGCACGGCGGACGAAAAGATCAAA 792
BSNT_02629___ 793 ACCCTTAATGCATGCGGAATCGAAGTTGCAGAGACACCTTCTGTCATGGG 842
||..|.|||||.||||||||||||||.||.||.||.||||||||||||||
BL01284___suc 793 ACGATGAATGCCTGCGGAATCGAAGTGGCTGAAACGCCTTCTGTCATGGG 842
BSNT_02629___ 843 TGAAACCTTAATCAAGGTGCTGAAAG-AGAAGAACTTGTTCGAAACTTGT 891
.|||||.||.||.||.||||||||.| |.|||..||| |.||||||.|||
BL01284___suc 843 AGAAACATTGATTAAAGTGCTGAAGGAAAAAGGTCTT-TACGAAACGTGT 891
BSNT_02629___ 892 AAAACGCATTAA 903
|||||.||.|.|
BL01284___suc 892 AAAACACACTGA 903
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