Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02620 and BL01290
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:18
# Commandline: needle
# -asequence dna-align/BSNT_02620___rplS.1.5803.seq
# -bsequence dna-align/BL01290___rplS.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02620___rplS-BL01290___rplS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02620___rplS-BL01290___rplS.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02620___rplS
# 2: BL01290___rplS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 348
# Identity: 316/348 (90.8%)
# Similarity: 316/348 (90.8%)
# Gaps: 0/348 ( 0.0%)
# Score: 1452.0
#
#
#=======================================
BSNT_02620___ 1 ATGCAAAAACTAATTGAAGATATCACAAAAGAACAGCTTCGTACTGATCT 50
|||||||||.|.||||||||.||||||||||||||..|.||.||||||.|
BL01290___rpl 1 ATGCAAAAATTGATTGAAGAAATCACAAAAGAACAATTGCGCACTGATTT 50
BSNT_02620___ 51 TCCTGCGTTCCGTCCTGGTGACACTTTACGTGTACACGTTAAAGTTGTTG 100
.||||||||||||||||||||.||||||||||||||||||||||||||.|
BL01290___rpl 51 GCCTGCGTTCCGTCCTGGTGATACTTTACGTGTACACGTTAAAGTTGTCG 100
BSNT_02620___ 101 AGGGTAACCGTGAGCGTATCCAGATCTTTGAAGGTGTTGTGATTAAGCGT 150
|||||||||||||||||||||||.|.|||||||||||.||||||||||||
BL01290___rpl 101 AGGGTAACCGTGAGCGTATCCAGGTTTTTGAAGGTGTCGTGATTAAGCGT 150
BSNT_02620___ 151 CGTGGTGGTGGAATCAGCGAAACGTTCACAGTTCGTAAGATTTCTTACGG 200
||||||||.||||||||||||||.||||||||||||||||||||||||||
BL01290___rpl 151 CGTGGTGGCGGAATCAGCGAAACTTTCACAGTTCGTAAGATTTCTTACGG 200
BSNT_02620___ 201 TGTTGGCGTTGAACGTACTTTCCCAGTACACACACCAAAAATCGCGAAAA 250
|||.||.|||||.|||||.||||||.|.||||||||.|||||||||||||
BL01290___rpl 201 TGTCGGAGTTGAGCGTACATTCCCATTGCACACACCGAAAATCGCGAAAA 250
BSNT_02620___ 251 TCGAAGTTGTACGTTACGGTAAAGTACGCCGTGCTAAACTTTACTACCTG 300
||||||||||.|||.|.|||||||||||||||||.||||||||.|||.||
BL01290___rpl 251 TCGAAGTTGTCCGTCATGGTAAAGTACGCCGTGCGAAACTTTATTACTTG 300
BSNT_02620___ 301 CGTGAACTTCGCGGAAAAGCGGCTCGTATTAAAGAGATCAGACGATAA 348
||.||||||||.|||||||||||||||||||||||.||||||||||||
BL01290___rpl 301 CGCGAACTTCGTGGAAAAGCGGCTCGTATTAAAGAAATCAGACGATAA 348
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