Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01835 and BL01343

See Amino acid alignment / Visit BSNT_01835 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:20
# Commandline: needle
#    -asequence dna-align/BSNT_01835___yisL.1.5803.seq
#    -bsequence dna-align/BL01343___yisL.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01835___yisL-BL01343___yisL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01835___yisL-BL01343___yisL.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01835___yisL
# 2: BL01343___yisL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 384
# Identity:     257/384 (66.9%)
# Similarity:   257/384 (66.9%)
# Gaps:          54/384 (14.1%)
# Score: 823.5
# 
#
#=======================================

BSNT_01835___      1 ATGACACACCTACATATTACGACATGGGTGGTAGCGCTGATTCTGCTTTT     50
                     |||||.||..|.|||||.|||.|.||||||.|.|||||.|||.|..|.||
BL01343___yis      1 ATGACGCATATGCATATCACGTCTTGGGTGATCGCGCTCATTTTAGTGTT     50

BSNT_01835___     51 CGTCAGC-TACTCGCTGTATTCGTCAGG-AAGTGCAAAGGGCGCAAAAAT     98
                     ||| .|| |||..|||.||.||.||.|| ||..||||| |||||||||||
BL01343___yis     51 CGT-TGCTTACGGGCTTTACTCATCTGGAAACAGCAAA-GGCGCAAAAAT     98

BSNT_01835___     99 CACTCATATGATTCTGCGGTTATTCTA---TATCCTTATTATTTTGACAG    145
                     .||.|||||||||||.||.||||||||   ||||.||||.|||   ||.|
BL01343___yis     99 TACACATATGATTCTCCGCTTATTCTATATTATCGTTATCATT---ACCG    145

BSNT_01835___    146 GAGCTGAGCTGTTTGTCCGTTT--CGCCAACTGGAACGGAGAATAC----    189
                     |.||..||||.|||.|....||  ||.||  |||||||||||||||    
BL01343___yis    146 GGGCGCAGCTTTTTTTAAAGTTCACGGCA--TGGAACGGAGAATACATAG    193

BSNT_01835___    190 -----GCCGGCAAAATGATT-CTGGGCATTATCACCATCGGCCTGATGGA    233
                          |||          || ||.|||.|.|||||||||||..|.|||||
BL01343___yis    194 CGAAGGCC----------TTGCTCGGCCTCATCACCATCGGATTCATGGA    233

BSNT_01835___    234 AATGCTCCTCATCCGCAAGAAAAAAGAAAAATCAACAGGAGGCC------    277
                     ||||||..|.|||||||.||||||.|.||||       |.||||      
BL01343___yis    234 AATGCTTTTAATCCGCAGGAAAAACGGAAAA-------GCGGCCACTGGG    276

BSNT_01835___    278 -TGTGGATCGGCTTCGTCATTGTCCTTTTGC---TGACAGTGCTGCTCGG    323
                      |.||||||||||   |.||||||.||.|||   ||||.||..||||.||
BL01343___yis    277 ATCTGGATCGGCT---TTATTGTCGTTCTGCTCTTGACGGTTGTGCTTGG    323

BSNT_01835___    324 TCTGCATTTGCCAATTGGTTTTCAATTGTTTTAA    357
                     .||.|...|.||..|.||.|||.||.||||||||
BL01343___yis    324 ACTCCGGCTTCCGCTGGGCTTTAAAGTGTTTTAA    357


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