Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04979 and BL01352
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:10
# Commandline: needle
# -asequence dna-align/BSNT_04979.1.5803.seq
# -bsequence dna-align/BL01352___yvgM.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04979-BL01352___yvgM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04979-BL01352___yvgM.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04979
# 2: BL01352___yvgM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 724
# Identity: 473/724 (65.3%)
# Similarity: 473/724 (65.3%)
# Gaps: 107/724 (14.8%)
# Score: 1492.5
#
#
#=======================================
BSNT_04979 1 ATGGCTTTACTGCCGAGTAGCATAAGCGCTTCA-GAATTTTTCACACCCG 49
|| ||||.| ||.||.||..|.||..
BL01352___yvg 1 ---------------------AT----GCTTGAGGAGTTCTTATCCCCAA 25
BSNT_04979 50 TTGCGCTTTCCTTTCAGGTGGCGGCAGTTGCCGGAATTGTTGTCATTATT 99
|||...|||||.|.||.||..|.||.|..||.||.||..|.|.|.||.|.
BL01352___yvg 26 TTGAAATTTCCATCCAAGTATCAGCCGCAGCGGGCATCATCGCCGTTTTG 75
BSNT_04979 100 CTCGGAACACTTGCTGGAGCATGGATG-TCACGGGC-ATCATTTTTCGGA 147
||.||||| |||||.||| ||.| || |.||| |.|| ||
BL01352___yvg 76 CTTGGAAC---TGCTGCAGC---GAGGCTC-CTGGCGAACA-------GA 111
BSNT_04979 148 AA----AACGGCA--------CTCGAAAC----ATGTTTTATGCTTCCGC 181
|| ||.|||| .||||.|| ||| |||||.||||
BL01352___yvg 112 AACTTTAAAGGCAAGTCCATTATCGAGACGGTGATG----ATGCTGCCGC 157
BSNT_04979 182 TCGTTCTTCCGCCTACTGTTGTCGGTTTTATTTTGATCGTCATTTTCGGA 231
|||||||.|||||.||.||||||||.|||.||||.||.||.||.||||||
BL01352___yvg 158 TCGTTCTGCCGCCGACCGTTGTCGGATTTTTTTTAATTGTGATCTTCGGA 207
BSNT_04979 232 AAGCACAGCTTCATCGGACAAGC--CATCGA----GTGGATTTTCCAGCA 275
|.|||.|||.|.||||||| || .||.|| ||| ||||.|||
BL01352___yvg 208 AGGCAGAGCGTGATCGGAC--GCTTGATTGAAAACGTG---TTTCAAGC- 251
BSNT_04979 276 GCCTGTCATTTTCACCTGGTGGGCCGCTGTGATCGCCTCGGCTGTTGTAG 325
|||.||.|||||.|||||||||||.||||||||||||.||||.|||||.|
BL01352___yvg 252 GCCGGTTATTTTTACCTGGTGGGCAGCTGTGATCGCCGCGGCGGTTGTCG 301
BSNT_04979 326 CCTTTCCGCTTATGTATCAATCAGCCAAAACCGGATTT---GCTGACATT 372
|.||.|||.|.||||||||.||.||.|||.|||||||| |||| |.
BL01352___yvg 302 CGTTCCCGTTAATGTATCAGTCTGCAAAATCCGGATTTCTGGCTG---TC 348
BSNT_04979 373 GATCCCGATATACAAGG-TGCGGCAATGGTAGACGGCGCTAGCAGATGGA 421
||.|.|||.|| |.||| |||.||.|.|||.|||||.||.|.|..|||||
BL01352___yvg 349 GACCGCGACAT-CGAGGATGCAGCGAGGGTTGACGGAGCAAACGAATGGA 397
BSNT_04979 422 AAGTGTTTATCCATATCTCCGTCCCGCTTGCCTATCC------TTCGTTA 465
..|||||..||..|.||.||||.||.||||| |||| .||
BL01352___yvg 398 GGGTGTTCCTCTTTGTCACCGTTCCCCTTGC--ATCCAATGGAATC---- 441
BSNT_04979 466 CTGACCGGAAGCATCCTCAGCCTTGCGCGGGCGCTCGGAGAATTTGGCGC 515
.||||.||.|...|.||||||.|||||.|||||||.||.||.||||||||
BL01352___yvg 442 ATGACGGGGATTGTGCTCAGCTTTGCGAGGGCGCTTGGCGAGTTTGGCGC 491
BSNT_04979 516 AACACTCATGTTTGCAGGAAACATCCCCGGTGTTACGCAAACACTGCCGA 565
|||.||.||||||||.||.|..|||||.||.||.|||||.||..||||||
BL01352___yvg 492 AACGCTGATGTTTGCGGGCATTATCCCGGGGGTGACGCAGACGGTGCCGA 541
BSNT_04979 566 CGGCGATATATGTCGCATTGGATTCCGGCAACAATACCCTTGCTTGGGCG 615
||||||||||..|.||..|.|||||.|||||.|..||.||.||.|||..|
BL01352___yvg 542 CGGCGATATACTTGGCGATCGATTCGGGCAATATGACGCTGGCATGGATG 591
BSNT_04979 616 TGGGTCGTCTGTATTGTAGTCATTTCCTTTTTGATGCTGTTTTT----CA 661
|||||||.||.|||.|...||||.||.||||||||||||||||| ||
BL01352___yvg 592 TGGGTCGCCTCTATCGCGATCATCTCGTTTTTGATGCTGTTTTTTGTGCA 641
BSNT_04979 662 -TTCAACAGAAAAAAACGCACTAA 684
|||| ||.|||||..|
BL01352___yvg 642 GTTCA--AGCAAAAATAG------ 657
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