Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04412 and BL01356
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:35
# Commandline: needle
# -asequence dna-align/BSNT_04412___melA.1.5803.seq
# -bsequence dna-align/BL01356___melA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04412___melA-BL01356___melA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04412___melA-BL01356___melA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04412___melA
# 2: BL01356___melA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1320
# Identity: 975/1320 (73.9%)
# Similarity: 975/1320 (73.9%)
# Gaps: 42/1320 ( 3.2%)
# Score: 3499.5
#
#
#=======================================
BSNT_04412___ 1 ATGAAAAAGATTACATTTATCGGTGCAGGGAGCACGATTTTCGCCAAAAA 50
||||..||.|||.|.||||||||.||.||.|||||.|||||.||.|||||
BL01356___mel 1 ATGACTAAAATTGCTTTTATCGGAGCTGGAAGCACAATTTTTGCGAAAAA 50
BSNT_04412___ 51 TGTTTTGGGAGACTGCCT----GTTAACAGAAGCACTGAATGGATTTGAG 96
|||..||||.|||||.|| ||| |.| ||..|.||.||||||||.
BL01356___mel 51 TGTGCTGGGGGACTGTCTGATGGTT--CCG--GCGGTCAACGGATTTGAA 96
BSNT_04412___ 97 TTCGCTCTTTACGACATTGATCCCAAACGCCTGCAGGAATC-CCAGCTCA 145
||.|||.|.||.||.||.|||||.||.|||||..|.||||| ..||.| |
BL01356___mel 97 TTTGCTTTGTATGATATCGATCCGAAGCGCCTCAAAGAATCTAAAGAT-A 145
BSNT_04412___ 146 TGCTCGAAAATCTAAGAGACCGTTATAA-CCCAAGTGTGGCCATCAACAG 194
||||.||..||.|||.|.||||.||||| ..||.| ||..|.|||..|..
BL01356___mel 146 TGCTTGAGCATTTAAAAAACCGCTATAATGACACG-GTATCGATCCGCGC 194
BSNT_04412___ 195 CTATGATGACAGAAAACTCGCCTT-------GCAAAACGCAGGCTATGTC 237
||||||.||||||||....||.|| ||.||| ||.||.
BL01356___mel 195 CTATGACGACAGAAAGGAAGCTTTGGCGGGAGCGAAA-------TACGTG 237
BSNT_04412___ 238 ATCAATGCGATTCAGGTTGGAGGATACAAACCGAGCACAGTCATCGATTT 287
||||||||.||||||||.||.||.||.||||||.||||||||||||||||
BL01356___mel 238 ATCAATGCCATTCAGGTCGGCGGCTATAAACCGGGCACAGTCATCGATTT 287
BSNT_04412___ 288 CGAGATTCCTAAACGGTATGGGCTGCGCCAGACGATCGCCGATACAGTCG 337
.||||||||.|||...||.||.||....||||||||.||||||||.||||
BL01356___mel 288 TGAGATTCCGAAAAAATACGGCCTCAAGCAGACGATTGCCGATACGGTCG 337
BSNT_04412___ 338 GCATCGGCGGGATATTCAGATCTCTCAGAACAATCCCGGTCTTATTTGAT 387
|.|||||||||||||||||..|.||..|.||.||.||.||.|||||.|||
BL01356___mel 338 GAATCGGCGGGATATTCAGGGCGCTGCGGACGATTCCCGTTTTATTGGAT 387
BSNT_04412___ 388 ATCGCAAAAGATATGGAGGAAATGTGC----CCTGACGCATGGTTCTTAA 433
||.||||||||.||.| ||.|.|| ||.|||||.|||.||||||
BL01356___mel 388 ATGGCAAAAGACATCG----AAAGCGCGGCGCCCGACGCCTGGCTCTTAA 433
BSNT_04412___ 434 ACTATACAAATCCAATGGCCACTCTTACAGGCGCCATGCTCCGCTATACC 483
|.||.|||||.||.|||||..||.|.||.||.||..|.||||||||.||.
BL01356___mel 434 ATTACACAAACCCGATGGCTTCTTTAACCGGTGCGCTTCTCCGCTACACG 483
BSNT_04412___ 484 AATATCAAAACAATCGGGCTCTGCCACAGTGTTCAAGTGTGCACGAAGGA 533
.|..|.|||||..||||.|||||||||||.||||||||.|||||.||.||
BL01356___mel 484 GACGTGAAAACGGTCGGTCTCTGCCACAGCGTTCAAGTATGCACAAAAGA 533
BSNT_04412___ 534 TTTATTTAAAGCTCTCGGAATGGAGCATGACGGAATTGAGGAACGCATCG 583
|.|.||.|||.|.|||||.|||.|||||||..||||.||.|||...||||
BL01356___mel 534 TCTTTTCAAATCCCTCGGCATGAAGCATGAACGAATCGAAGAAAAAATCG 583
BSNT_04412___ 584 CGGGAATCAATCATATGGCTTGGCTTTTGGAAGTCAAAAAAGACGGCACA 633
|.||.||||||||||||||.||||||.|.||||||||..|||||||.|.|
BL01356___mel 584 CCGGCATCAATCATATGGCCTGGCTTCTTGAAGTCAAGCAAGACGGAAGA 633
BSNT_04412___ 634 GATTTATATCCAGAAATCAAAAGGAGAGCGAAAGAAAAACAAAAAACAAA 683
||.||.|||||||||||.||||.|.|.||.|||||||||||.|||||.||
BL01356___mel 634 GACTTGTATCCAGAAATTAAAAAGCGGGCAAAAGAAAAACAGAAAACGAA 683
BSNT_04412___ 684 GCATCATGATATGGTGCGGTTTGAATTAATGGATAAGTTCGGCTATTATG 733
.|||..|||.|||||..||||||||.|.||||||||.||||||||.||||
BL01356___mel 684 ACATGGTGACATGGTCAGGTTTGAACTGATGGATAAATTCGGCTACTATG 733
BSNT_04412___ 734 TCACGGAATCGTCCGAACATAACGCAGAGTATCACCCATACTTTATTAAA 783
|.||.||||||||||||||||||||.|||||.|||||.||.|||||||||
BL01356___mel 734 TGACCGAATCGTCCGAACATAACGCGGAGTACCACCCTTATTTTATTAAA 783
BSNT_04412___ 784 CGAAATTACCCTGAACTGATCAGCGAGCTGCAAATCCCGCTCGACGAATA 833
.|...|||.||.||||||||....||.|||.|.||||||.|.||||||||
BL01356___mel 784 AGCCGTTATCCCGAACTGATTGAAGAACTGAATATCCCGATTGACGAATA 833
BSNT_04412___ 834 TCCGAGAAGGTGCGTCAAGCAGATTGAAAATTGGGAGAAAATGCGGGATG 883
|..|||||||||||..|||||||||.||||||||||.||.|||||.|..|
BL01356___mel 834 TTTGAGAAGGTGCGAGAAGCAGATTCAAAATTGGGAAAAGATGCGCGGCG 883
BSNT_04412___ 884 ATATCGTCAACAATAAAAACCTTACGCACGAACGCTCAAAAGAATATGGT 933
|.||||||..||||....|..|.||.|||||.||.|||||.|||||.||.
BL01356___mel 884 AAATCGTCGGCAATCGGCATTTAACCCACGAGCGGTCAAACGAATACGGC 933
BSNT_04412___ 934 TCAAGAATTATAGAAGCAATGGAAACAAACGAACCATTCACCTTCGGAGG 983
||||||||.||||||||.||||||||...|.|.||.||.||.|||||.||
BL01356___mel 934 TCAAGAATCATAGAAGCGATGGAAACCGGCCAGCCGTTTACATTCGGCGG 983
BSNT_04412___ 984 AAACGTCTTGAATACAGGGCTGATCGCCAACCTTCCTTCAAAAGCGGTTG 1033
.||.||||||||||.|||..||||..|.||.|||||...||||||.||.|
BL01356___mel 984 TAATGTCTTGAATAAAGGATTGATTACAAATCTTCCGGAAAAAGCCGTCG 1033
BSNT_04412___ 1034 TGGAAGTGACATGCGTCGCCGACAGAAAAAAAATTACACCGTGCTTCGCC 1083
|.||||||||.||||||||.||..|.||....||.||.|||||||.|||.
BL01356___mel 1034 TCGAAGTGACGTGCGTCGCTGAGCGGAACCGGATCACTCCGTGCTACGCG 1083
BSNT_04412___ 1084 GGAGAACTGCCTGAGCAGCTTGCCGCCTTAAACCGGACGAATATTAATAC 1133
||.||.|||||.||.|||||.||.||.|||||.||.||.|||||.|||||
BL01356___mel 1084 GGCGAGCTGCCAGAACAGCTGGCTGCTTTAAATCGCACCAATATCAATAC 1133
BSNT_04412___ 1134 ACAGCTGATGACAATCGAAGCGGCTGTCACACGGAAAAAAGAAGCG---G 1180
|||||||.|.||.||.|||||||| .|||...||||.|.|||.| .
BL01356___mel 1134 ACAGCTGTTAACGATTGAAGCGGC---AACAACAAAAAGAAAAGAGCACA 1180
BSNT_04412___ 1181 TTTACCAAGCTGCAATGCTTGATCCGCATACAAGC-GCGGAGCTTTCCAT 1229
|||||||.||||||.|||||||||||||||| .|| |||||..|.||.||
BL01356___mel 1181 TTTACCATGCTGCATTGCTTGATCCGCATAC-GGCTGCGGAATTATCGAT 1229
BSNT_04412___ 1230 GAAGGACATCATCTCCATGTGTGACGATTTATTTGCAGCACACGGCGATT 1279
|.|.||.|||.|...||||||.||.||.||..|.|.||||||||||||.|
BL01356___mel 1230 GGATGATATCGTAAGCATGTGCGATGAATTGATCGAAGCACACGGCGACT 1279
BSNT_04412___ 1280 GGCTTCCGGAATACAAATAA 1299
||||.|||||||...|||||
BL01356___mel 1280 GGCTGCCGGAATTTGAATAA 1299
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