Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00690 and BL01382
See
Amino acid alignment /
Visit
BSNT_00690 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:19
# Commandline: needle
# -asequence dna-align/BSNT_00690___gdh.1.5803.seq
# -bsequence dna-align/BL01382___gdh.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00690___gdh-BL01382___gdh.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00690___gdh-BL01382___gdh.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00690___gdh
# 2: BL01382___gdh
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 832
# Identity: 545/832 (65.5%)
# Similarity: 545/832 (65.5%)
# Gaps: 92/832 (11.1%)
# Score: 1580.0
#
#
#=======================================
BSNT_00690___ 1 ATGTATCCGGACTTAAAAGGAAAAGTCGTCGCTATTACAGGAGCTGCTTC 50
||||||||....|||.|.||||||...||||.|||.|||||.||.|.|.|
BL01382___gdh 1 ATGTATCCAAGTTTAGAGGGAAAAACGGTCGTTATCACAGGGGCGGGTAC 50
BSNT_00690___ 51 AGGGCTCGGAAAGGCAATGGCCATTCGCTTCGGCAAGGAGCAGGCAAAAG 100
|||.||.|||||.||.|||||..|.||||||||....||..|.||.||.|
BL01382___gdh 51 AGGCCTTGGAAAAGCGATGGCACTGCGCTTCGGTGCTGAAAAAGCCAATG 100
BSNT_00690___ 101 TGGTTATCAACTATTAT--AGTAATAAACAAGATCC-GAACGA---GGT- 143
|.||.|||||.|||| | ||.|| .||.||.|||| ||| || |||
BL01382___gdh 101 TAGTGATCAATTATT-TCAAGGAA-GAAGAAAATCCTGAA-GAGACGGTG 147
BSNT_00690___ 144 -----AAAAGAAGAGGTCATCAAGGCGGGCG-GTGAAGCTGTTGTCGTCC 187
||.|||| || ||.| ||.|.||| |.|| |||.|||.|
BL01382___gdh 148 GAGAAAATAGAA-AG--CAGC--GGAGCGCGCGCGA-----TTGCCGTTC 187
BSNT_00690___ 188 AAGGAGATGTCACGAAAGAGGAAGATGTAAAAAATATCG-TG--CAAAC- 233
|||||||||||.|.|||||.||.|||||||| |.|| || ||.||
BL01382___gdh 188 AAGGAGATGTCTCAAAAGAAGATGATGTAAA----AGCGCTGATCAGACA 233
BSNT_00690___ 234 GGC----AATTAAAGAGTTCGGCACACTCGATATTATGATTAATAATGCC 279
||| .|||.| |||||..|..|.|||.|.|||.|.||.||.||.
BL01382___gdh 234 GGCTGTTGATTCA----TTCGGTTCCGTTGATGTGATGGTGAACAACGCA 279
BSNT_00690___ 280 GGTCTTGAAAATCCTGTGCCATCTCACGAAATGCCGCTTAAGGATTGGGA 329
||..|.||||||...||.||.|||.|.||..||.|.||..||||.|||
BL01382___gdh 280 GGGGTGGAAAATGAAGTACCTTCTGAGGATTTGGCTCTAGAGGACTGG-- 327
BSNT_00690___ 330 TAAA----GTCATCGGCACAAACTTAACAGG--TGCCTTTTTAGGAAGCC 373
|| |||||....||.||.||.||.|| || |||.|||||.|||
BL01382___gdh 328 --AACCGCGTCATATCAACCAATTTGACGGGGATG--TTTCTAGGATGCC 373
BSNT_00690___ 374 GTGAAGCGATTAAATATTTCGTAGAAAACGATATCAAGGGAAATGTCATC 423
|.||||||||....|||.|..|.||..|..||||.||.||....||||||
BL01382___gdh 374 GGGAAGCGATCGGCTATATGCTCGACCATAATATTAAAGGCTCGGTCATC 423
BSNT_00690___ 424 AACATGTCCAGTGTGCA----CGAAGTGATTCCTTGGCCGTTATTTGTTC 469
||.||||||||.||.|| |.| ||.||.||||||...|||||.|
BL01382___gdh 424 AATATGTCCAGCGTCCATCAGCAA----ATCCCGTGGCCGCATTTTGTCC 469
BSNT_00690___ 470 ACTACGCGGCAAGTAAAGGCGGGATAAAGCTGATGACAGAAA-CATTGGC 518
|.||.||||||||.||.||||||..|||.|||.||||.|||| |.|||.|
BL01382___gdh 470 ATTATGCGGCAAGCAAGGGCGGGGCAAAACTGCTGACGGAAACCCTTGCC 519
BSNT_00690___ 519 GTTGGAATACGCGCCGAAGGGCATTCGCGTGAACAATATCGGGCCAGGTG 568
.|| |||||.||.|||||.||.||.||.||.|||...|||||.||.||||
BL01382___gdh 520 CTT-GAATATGCCCCGAAAGGAATCCGGGTAAACGCGATCGGCCCCGGTG 568
BSNT_00690___ 569 CGATCAATACGCCAATCAATGCTGAAAAATTTGCTGACCCTAAACAGAAA 618
|.|||.|||||||.||.||.||.||||||||.|||||.||..||..||||
BL01382___gdh 569 CAATCGATACGCCGATTAACGCCGAAAAATTCGCTGATCCCGAATTGAAA 618
BSNT_00690___ 619 ----GCAGATGTAGAAAGCATGATTCCGATGGGGTATATCGGCGAACCGG 664
|| |.|.|.||| .|||||||.||.|||||||||||..|.||||
BL01382___gdh 619 AAAGGC-GTTATTGAA---TTGATTCCTATAGGGTATATCGGAAAGCCGG 664
BSNT_00690___ 665 AGGAGATCGCCGCAGTG-GCAGTGTGGCTTGC-TTCGAAGGAATCCAGCT 712
||||..||||.|| .|| ||.|..|||||.|| |.|||| |||.|.||||
BL01382___gdh 665 AGGAAGTCGCAGC-CTGCGCGGCCTGGCTAGCATCCGAA-GAAGCAAGCT 712
BSNT_00690___ 713 ATGTTACAGGCATCACATTGTTTGCGGACGGCGGAATGACGAAATATCCT 762
||||.||.|||.|.||..|||.||..||||||||.|||||.|||||.||.
BL01382___gdh 713 ATGTGACGGGCCTGACGCTGTATGTAGACGGCGGGATGACAAAATACCCG 762
BSNT_00690___ 763 TCTTTCCAGGCAGGCCGCGGTTAA-------- 786
...|||||.||.|| ||
BL01382___gdh 763 GGATTCCAAGCGGG--------AAAAGGGTGA 786
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.