Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03551 and BL01384
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:33
# Commandline: needle
# -asequence dna-align/BSNT_03551___yqjH.1.5803.seq
# -bsequence dna-align/BL01384___dinB1.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03551___yqjH-BL01384___dinB1.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03551___yqjH-BL01384___dinB1.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03551___yqjH
# 2: BL01384___dinB1
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1289
# Identity: 905/1289 (70.2%)
# Similarity: 905/1289 (70.2%)
# Gaps: 76/1289 ( 5.9%)
# Score: 2983.5
#
#
#=======================================
BSNT_03551___ 1 ----ATGCCG-----GGAAAGAGCCGAATTATTTTCCATATTGATATGAA 41
.|||.| ..||||.|..||.|.||.||.|||||.||||||||
BL01384___din 1 TTGTCTGCTGATAAACAAAAGGGGAGAGTCATCTTTCATATCGATATGAA 50
BSNT_03551___ 42 TAGCTTTTATGCGTCGGTTGAAATGGCATATGATCCGGCTCTCCGGGGAA 91
.||||||||.|||||.|||||||||||.||||| |.||.||..|||
BL01384___din 51 CAGCTTTTACGCGTCTGTTGAAATGGCGTATGA-----CCCTTCGCTGAA 95
BSNT_03551___ 92 A-----GCCGGTCGCAGTTGCCGGAAACGTAAAAGAGCGAAAGGGCATTG 136
| ||||.|.||..|.||.|||||.|..||.|||||.||.||.||.|
BL01384___din 96 AGGCAGGCCGCTAGCCATCGCGGGAAATGCGAAGGAGCGGAAAGGAATCG 145
BSNT_03551___ 137 TGGTAACATGCAGCTATGAAGCAAGAGCGCGCGGCGTCAAAACAACGATG 186
|.||.||.|||||||||||.||.|||||.||||||||||||.|..|.|||
BL01384___din 146 TCGTCACGTGCAGCTATGAGGCGAGAGCACGCGGCGTCAAACCGCCCATG 195
BSNT_03551___ 187 CCGGTTTGGCAAGCGAAGCGCCATTGTCCTGAGCTCATCGTTCTTCCGCC 236
|||.|.|||.||||||||||.|..|||||.|||||.|||||....|||||
BL01384___din 196 CCGCTCTGGGAAGCGAAGCGGCTCTGTCCCGAGCTGATCGTCAAGCCGCC 245
BSNT_03551___ 237 GAACTTTGACCGCTATAGAAACTCTTCACGAGCGATGTTTACCA--TTCT 284
|||.||.||||||||.||||.|||||||.|||..|||||| || |.||
BL01384___din 246 GAATTTCGACCGCTACAGAAGCTCTTCAAGAGAAATGTTT--CAAGTGCT 293
BSNT_03551___ 285 TCGTGAATATACTGACCTGGTGGAGCCTGTCTCTATCGACGAAGGCTATA 334
..|.||.||.||.|||||.||.||||||||.||.|||||||||||.||.|
BL01384___din 294 CAGGGAGTACACGGACCTTGTCGAGCCTGTTTCGATCGACGAAGGGTACA 343
BSNT_03551___ 335 TGGACATGACCGATACACCATACAATAGCCGCGCTCTAGAGACGGCAAAA 384
|||||.|.||.|||||.|||||||..|..||.||....||.||||||||.
BL01384___din 344 TGGACTTAACGGATACGCCATACAGAAATCGGGCATGCGAAACGGCAAAG 393
BSNT_03551___ 385 GAAATCCA-AAGCAGGCTGCAAAAAGAGCTGCTGCTCCCGTCAAGCATAG 433
|||||.|| .||| |.||.|||||.||.||||||||.|||||||||||.|
BL01384___din 394 GAAATTCAGGAGC-GCCTTCAAAAGGAACTGCTGCTTCCGTCAAGCATCG 442
BSNT_03551___ 434 GGATTGCGCCGAATAAATTTCTCGCTAAGATGGCGTCTGATATGAAAAAA 483
||||.||.|||||||||||.||.||.||.|||||.||.|||||||||||.
BL01384___din 443 GGATCGCTCCGAATAAATTCCTGGCCAAAATGGCTTCGGATATGAAAAAG 492
BSNT_03551___ 484 CCGCTTGGAATTACGATTTTAAGAAAGAGGCAAGTGCCTGATATCCTGTG 533
|||||.||.|||||||||||.||||||.|..|||||||....||.||.||
BL01384___din 493 CCGCTCGGCATTACGATTTTGAGAAAGCGTGAAGTGCCCCGGATTCTTTG 542
BSNT_03551___ 534 GCCGCTTCCTG----TTGGAGAGATGCACGGAGTCGGCAAAAAGACAGCG 579
||| |.|| |..|.||||||.|||||||||||...||.||.||.
BL01384___din 543 GCC----CATGGACATCAGCGAGATGTACGGAGTCGGCCGGAAAACCGCC 588
BSNT_03551___ 580 GAAAAACTGAAGGGACTCGGCATCCATACAATCGGAGAGCTAGCTGCAGC 629
|||||.||.|||...||||..|||.|.|..|||||.||..|.|||||.||
BL01384___din 589 GAAAAGCTTAAGACGCTCGAGATCGAAAAGATCGGCGATTTGGCTGCCGC 638
BSNT_03551___ 630 TGATGAACACTCCCTGAAA-CGCCTGCTTGGCATAAACGGTCCGCGCCTT 678
.|||||..| |.|.|.||| |||||.||.|||||.|||||.||.|| .||
BL01384___din 639 AGATGAGTA-TGCTTTAAAGCGCCTCCTCGGCATCAACGGCCCCCG-TTT 686
BSNT_03551___ 679 AAAAATAA-AGCAAATGGCATTCAC-CATGCGCCGGTTGA--CCCGGAGC 724
|||||.|| .|||||.|||||..|| ||.|.|..| ||| ||| ||..
BL01384___din 687 AAAAAGAAGGGCAAACGGCATCGACACAGGAGAAG--TGAATCCC-GACA 733
BSNT_03551___ 725 GCATTTACGAATTTAAAAGCGTCGGCAACTCATCGACACTTTCCCATGAT 774
|.||.||||||||.||||||||||||||.||.|||||.||..|.|||||.
BL01384___din 734 GAATATACGAATTCAAAAGCGTCGGCAATTCCTCGACCCTCCCGCATGAC 783
BSNT_03551___ 775 TCCAGTGATGAAGAAGAGCTGTTAGGCGTCTTTAGA-AAGCTTGCCGCTT 823
..||..|||||..||||||||||.||..|..|| || ||||||.|....|
BL01384___din 784 AGCACAGATGAGAAAGAGCTGTTCGGACTGATT-GACAAGCTTTCAATCT 832
BSNT_03551___ 824 CTGTGAGTGCCCGTTTACAGCGCAAGGAAGTCATGGCTTCGAAGCTTTTT 873
|.||.||.|.|.|..|..||||.||.||.||||||||..|.||..||||.
BL01384___din 833 CAGTAAGCGACAGGCTGAAGCGAAAAGAGGTCATGGCAGCAAAAGTTTTC 882
BSNT_03551___ 874 ATTATGATTAGATATGCGGATTGGAAAACCATCACAAGAAGCACCACGCT 923
||.|||||..|.|.||||||.||||..|.|||.||||||||||..||.||
BL01384___din 883 ATCATGATCCGCTTTGCGGACTGGACGAACATAACAAGAAGCAAGACCCT 932
BSNT_03551___ 924 GAGAAACCCGATTGATCAAAAAAACGACATTTTGAAAGAAGCG-GAGCAC 972
....||.||||..|||..||||.||||.|||..|||.|||.|| .|||
BL01384___din 933 TCTGAATCCGACCGATTCAAAAGACGAAATTGCGAAGGAATCGAAAGC-- 980
BSNT_03551___ 973 CTCTTTTTTA---AACATTGGAATAAAAATCCTGTCAGGCTGCTTGGCAT 1019
|.||||.| |.||||||.|...||..|||||||||||..|.|||.|
BL01384___din 981 --CCTTTTCAGGCAGCATTGGCACGGAAGCCCTGTCAGGCTTTTGGGCGT 1028
BSNT_03551___ 1020 TACCGGAACGGATTTAGTAGAA---AAAG--AGCAGGCCTATAAACAGCT 1064
.||.|||||.||..|.|| .|| |||| |||.|.| ||||||||
BL01384___din 1029 GACGGGAACAGACCTCGT-CAATCGAAAGGAAGCCGTC----AAACAGCT 1073
BSNT_03551___ 1065 CGATTTGTTCAGCTTTAATGAAGATGCGAAGGATGAGCCTATTCAGCAGA 1114
.||||||||...||||.||||.|||||.||.||||||||.||.||..|..
BL01384___din 1074 TGATTTGTTTTCCTTTCATGAGGATGCCAAAGATGAGCCGATCCAAAAAG 1123
BSNT_03551___ 1115 TGATGGAAAAGCTGAATAAAAAGTACGGTACCAAACTGATCAGAAAAGGG 1164
||||||...|.||||||.||||.||.||.||..|.||.||||.|||||||
BL01384___din 1124 TGATGGCCGAACTGAATGAAAAATATGGAACAGACCTCATCAAAAAAGGG 1173
BSNT_03551___ 1165 ----GCAACGTTAAAAAAAGAGGAGAGCAAAACAAAGGGAACAAGCTTTA 1210
|.|..||.|||||| ||.||||||||.|..|||||||||||||
BL01384___din 1174 GTCAGGATTGTGAAAAAA----GAAAGCAAAACGAGCGGAACAAGCTTTA 1219
BSNT_03551___ 1211 ATAAAGATTTTTTTCATGATGAAAAGAAAAGCTGA---- 1245
|.|||||||||||.||.||.| |.|||.|||.|.|
BL01384___din 1220 ACAAAGATTTTTTCCAAGACG-AGAGACAAGATCAATAG 1257
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