Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02065 and BL01399

See Amino acid alignment / Visit BSNT_02065 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:33
# Commandline: needle
#    -asequence dna-align/BSNT_02065___yjgD.1.5803.seq
#    -bsequence dna-align/BL01399___yjgD.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02065___yjgD-BL01399___yjgD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02065___yjgD-BL01399___yjgD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02065___yjgD
# 2: BL01399___yjgD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 561
# Identity:     489/561 (87.2%)
# Similarity:   489/561 (87.2%)
# Gaps:           0/561 ( 0.0%)
# Score: 2157.0
# 
#
#=======================================

BSNT_02065___      1 ATGGCTAAAGCGATTAAACGAATCCAAAAAATCGAGGTAACAGAAGAGGA     50
                     |||||||.|||||||||||||||.||.|||||||||.||||.||||||||
BL01399___yjg      1 ATGGCTAGAGCGATTAAACGAATTCAGAAAATCGAGATAACCGAAGAGGA     50

BSNT_02065___     51 TCAGCGAAAGCGTGATTTGCGGGAAATTGAAGATGCTCTAGTTGATCACA    100
                     .|||.|||||||||||.||...|||||.||.|||||..||||.||..|.|
BL01399___yjg     51 CCAGAGAAAGCGTGATATGAAAGAAATAGAGGATGCATTAGTCGAAAATA    100

BSNT_02065___    101 AAGAAGCGATTCTCGAAACCTTGCATATGCTGGGCCATATGAACGAGCGC    150
                     |.|||||.|||||.||||...||||||||.|.|||||.|||||||||||.
BL01399___yjg    101 AGGAAGCCATTCTTGAAATGCTGCATATGATTGGCCACATGAACGAGCGT    150

BSNT_02065___    151 GGTGTCCTGCCGTTGCTCCGCGGCCTTTTTGGTCAAGGGGATAAAGTTCT    200
                     |||||..||||.|||||.||||||||||||||.|||||.|||||||||||
BL01399___yjg    151 GGTGTATTGCCATTGCTGCGCGGCCTTTTTGGCCAAGGAGATAAAGTTCT    200

BSNT_02065___    201 TGATATCCTGGTGAAAAAGGCAGATACAGAGGAAACAGCCAATACGCTGA    250
                     |||.|||.|.||||||||||||||||||||||||||.||||||||.||||
BL01399___yjg    201 TGACATCTTAGTGAAAAAGGCAGATACAGAGGAAACGGCCAATACACTGA    250

BSNT_02065___    251 AAAATCTGCTTCTTCTGTTTGGAACACTCGGCATGCTGGACGTGAAGCAG    300
                     |||||||||||||||||||.|||||.||.|||||||||||.||.||.|||
BL01399___yjg    251 AAAATCTGCTTCTTCTGTTCGGAACGCTTGGCATGCTGGATGTAAAACAG    300

BSNT_02065___    301 CTGGAGCCTCTCATTTTGAAAGTGAATGCGGGTGTGGCAAGCGCTGTAGA    350
                     ||.||.||||||||||||||||||||||||||.|||||||.|||.||.||
BL01399___yjg    301 CTTGAACCTCTCATTTTGAAAGTGAATGCGGGGGTGGCAAACGCGGTGGA    350

BSNT_02065___    351 GCAGAAAAACAGTGAAGAAAAGACAGGTTATTTTGATATTATCCGCTCGC    400
                     .|||||..||||.|||||.||.|||||||||||||||||.||||||||||
BL01399___yjg    351 ACAGAAGGACAGCGAAGAGAAAACAGGTTATTTTGATATCATCCGCTCGC    400

BSNT_02065___    401 TAAAAGACCCGGAAATCAACAAATCAATTACACTGCTCTTTTCCTTTTTA    450
                     |.|||||||||||||||||||||.||.||||.|||||.||.|||||||||
BL01399___yjg    401 TCAAAGACCCGGAAATCAACAAAGCAGTTACGCTGCTTTTCTCCTTTTTA    450

BSNT_02065___    451 AAAGGAATGGGACAAGATACAAAGGAGCTGGAACGCACGACGCAGCCTCC    500
                     |||||||||||||||||||||||||||||||||||||||||.||||||||
BL01399___yjg    451 AAAGGAATGGGACAAGATACAAAGGAGCTGGAACGCACGACTCAGCCTCC    500

BSNT_02065___    501 GGAACACCAAAAATATCATCAGGAACCCCGAGAGAAAAGGGGAATGAATA    550
                     .||.|||||||||.||||||||||||||||||||||||||||.|||||||
BL01399___yjg    501 AGAGCACCAAAAACATCATCAGGAACCCCGAGAGAAAAGGGGGATGAATA    550

BSNT_02065___    551 AGCGAGATTGA    561
                     ||.|.||||||
BL01399___yjg    551 AGAGGGATTGA    561


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