Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02056 and BL01407
See
Amino acid alignment /
Visit
BSNT_02056 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:32
# Commandline: needle
# -asequence dna-align/BSNT_02056___yjfB.1.5803.seq
# -bsequence dna-align/BL01407.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02056___yjfB-BL01407.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02056___yjfB-BL01407.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02056___yjfB
# 2: BL01407
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 182
# Identity: 110/182 (60.4%)
# Similarity: 110/182 (60.4%)
# Gaps: 22/182 (12.1%)
# Score: 263.0
#
#
#=======================================
BSNT_02056___ 1 ATGGATATCCCTGCTTTATCGGTTGCGATGCATCAAGCATCCCTTGCCCA 50
.|||||||..|||.||||||..|.||.|||..|||.||..|.|||...||
BL01407 1 TTGGATATTGCTGTTTTATCAATGGCCATGAGTCAGGCGGCTCTTTATCA 50
BSNT_02056___ 51 GAA--TGTAAATATTGCTTTAACGAAAAAAATG---CTGGACACCGCCCA 95
.|| ||.||||.|.||| ||.|||.|.| .||||.||||||.|
BL01407 51 AAACGTGCAAATGTCGCT-----GACAAAGACGGCTTTGGATACCGCCGA 95
BSNT_02056___ 96 GCAAAATGCCGATCAAACCTTAAAGATGATTCA------ACATCCGAC-T 138
.||||..||..|.||...|.||.|.|||.|.|| |||||| | |
BL01407 96 ACAAAGCGCACAGCAGCTCGTAGACATGGTGCAGGCGCCACATCC--CGT 143
BSNT_02056___ 139 CTCGGGCAAACC--ATTGATGTAAAAGCATAA 168
.||.|| |.|.| |||||..|.||||..|||
BL01407 144 TTCAGG-ACATCATATTGACTTGAAAGGCTAA 174
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.