Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

DNA alignment: BSNT_03782 and BL01411

See Amino acid alignment / Visit BSNT_03782 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:49
# Commandline: needle
#    -asequence dna-align/BSNT_03782___yqfA.1.5803.seq
#    -bsequence dna-align/BL01411___yqfA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03782___yqfA-BL01411___yqfA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03782___yqfA-BL01411___yqfA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03782___yqfA
# 2: BL01411___yqfA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1004
# Identity:     805/1004 (80.2%)
# Similarity:   805/1004 (80.2%)
# Gaps:          19/1004 ( 1.9%)
# Score: 3240.5
# 
#
#=======================================

BSNT_03782___      1 ATGGATCCGTCAACACTTATGATTCTGGCA---ATTGTCGCAGTAGCGAT     47
                     ||||||||||||||||   ||.||||...|   |||.||||||..|..||
BL01411___yqf      1 ATGGATCCGTCAACAC---TGTTTCTTTTACTTATTATCGCAGCCGGAAT     47

BSNT_03782___     48 CATTGTTTTGGCAGTATTTTTTACATTTGTGCCTGTAATGCTTTGGATTT     97
                     |||..|..|.||.||.||.||||||||.||.||.||.|||||.|||||.|
BL01411___yqf     48 CATCCTACTAGCTGTCTTCTTTACATTCGTCCCGGTCATGCTGTGGATCT     97

BSNT_03782___     98 CAGCTTTGGCAGCCGGAGTGAAAATCAGCATTTTCACTCTAGTTGGGATG    147
                     |.||||||||.||.||.||.|||||||||||||||||.||..|.||.|||
BL01411___yqf     98 CGGCTTTGGCCGCTGGTGTTAAAATCAGCATTTTCACACTGATCGGAATG    147

BSNT_03782___    148 AGGCTTCGCCGTGTCATTCCGAATCGGGTTGTTAACCCGCTGATTAAAGC    197
                     |||||.|||||.||||||||.||.||.||.||.||||||||.||.|||||
BL01411___yqf    148 AGGCTCCGCCGCGTCATTCCAAACCGCGTGGTGAACCCGCTCATCAAAGC    197

BSNT_03782___    198 CCATAAAGCGGGACTTAATGTTGGAACAAACCAGCTTGAAAGCCACTACC    247
                     .||.||||||||||||.||||||..|..||.|||||.|||||||||||.|
BL01411___yqf    198 GCACAAAGCGGGACTTGATGTTGCCATCAATCAGCTGGAAAGCCACTATC    247

BSNT_03782___    248 TGGCTGGAGGTAATGTTGACAGAGTCGTCAACGCGCTTATCGCCGCTCAG    297
                     |.||.||.||||||||||||.|.||||||||||||||||||||.||.||.
BL01411___yqf    248 TTGCAGGGGGTAATGTTGACCGGGTCGTCAACGCGCTTATCGCTGCCCAA    297

BSNT_03782___    298 CGAGCTAACATTGAACTCACATTCGAGCGCTGTGCTGCCATTGATCTTGC    347
                     ||.||.|||||||||||.|||||||...|.|||||.|||||.|||.|.||
BL01411___yqf    298 CGTGCAAACATTGAACTTACATTCGCCAGATGTGCGGCCATCGATTTAGC    347

BSNT_03782___    348 AGGCCGGGACGTGTTGGAAGCTGTTCAAATGAGCGTTAATCCTAAGGTGA    397
                     .|||||.||||||.|.|||||.||||||||||||||||||||.||.||.|
BL01411___yqf    348 GGGCCGTGACGTGCTTGAAGCCGTTCAAATGAGCGTTAATCCGAAAGTCA    397

BSNT_03782___    398 TTGAAACACCGTTCATTGCCGGTGTTGCAATGGACGGGATTGAAGTGAAA    447
                     |.|||||.|||||.|||||||||||.||||||||.||.||.|||||||||
BL01411___yqf    398 TCGAAACGCCGTTTATTGCCGGTGTAGCAATGGATGGTATCGAAGTGAAA    447

BSNT_03782___    448 GCGAAAGCGAGAATCACAGTAAGAGCGAATATCGAGCGCCTCGTCGGGGG    497
                     ||.||||||||||||||.||..|.||.||.|||||.|||||.||||||||
BL01411___yqf    448 GCAAAAGCGAGAATCACGGTTCGCGCTAACATCGACCGCCTTGTCGGGGG    497

BSNT_03782___    498 AGCAGGGGAAGAAACCATTGTAGCTCGTGTAGGTGAGGGGATCGTTTCTA    547
                     |||.||.||||||||.||..|.||.|||||.||.||.|||||||||||.|
BL01411___yqf    498 AGCGGGCGAAGAAACGATCATTGCCCGTGTCGGCGAAGGGATCGTTTCGA    547

BSNT_03782___    548 CAATCGGTTCATCTGATAATCATAAAAAAGTGCTTGAAAACCCTGACATG    597
                     ||||||||||.||.|||||||||||||||||||||||||||||.||.|||
BL01411___yqf    548 CAATCGGTTCTTCCGATAATCATAAAAAAGTGCTTGAAAACCCAGATATG    597

BSNT_03782___    598 ATTTCTCAGACAGTCCTTG-GAAAAGGATTGGACTCAGGAACTGCGTTTG    646
                     |||||.||.||.|| .||| |.|||||.|||||.|||||.||.|||||||
BL01411___yqf    598 ATTTCACAAACCGT-ATTGAGCAAAGGGTTGGATTCAGGTACAGCGTTTG    646

BSNT_03782___    647 AAATTCTCTCAATTGATATTGCAGATGTAGATATCGGCAAAAACATCGGT    696
                     |||||||.||.||.|||||.||.||.||.||.|||||||||||||||||.
BL01411___yqf    647 AAATTCTATCGATCGATATCGCTGACGTTGACATCGGCAAAAACATCGGA    696

BSNT_03782___    697 GCAATTTTACAAACCGATCAGGCTGAGGCTGATAAAAACATCGCGCAGGC    746
                     ||.|||.|.||||||||.||||||||.||.||||||||||||||.|||||
BL01411___yqf    697 GCGATTCTGCAAACCGACCAGGCTGAAGCCGATAAAAACATCGCCCAGGC    746

BSNT_03782___    747 AAAAGCGGAAGAACGACGTGCGATGGCTGTCGCTCAAGAACAGGAAATGC    796
                     .|||||||||||.||.||.||.|||||.||.||.||||||||||||||||
BL01411___yqf    747 GAAAGCGGAAGAGCGCCGCGCCATGGCGGTTGCGCAAGAACAGGAAATGC    796

BSNT_03782___    797 GTGCCCGCGTAGAAGAAATGCGCGCGAAAGTAGTAGAAGCCGAGGCGGAA    846
                     |.||||||||.||||||||||||||.|||||.||.||||||||.||.|||
BL01411___yqf    797 GCGCCCGCGTCGAAGAAATGCGCGCCAAAGTCGTCGAAGCCGAAGCCGAA    846

BSNT_03782___    847 GTGCCGCTTGCGATGGCAGAAGCTTTGCGCGAAGGGAATATTGGCGTCAT    896
                     |||||||||||.|||.|.||||||.|.|||...||.||.||.||||||||
BL01411___yqf    847 GTGCCGCTTGCAATGTCTGAAGCTCTCCGCAGCGGAAAAATCGGCGTCAT    896

BSNT_03782___    897 GGATTACATGAATATCAAGAATATCGATGCTGACACAGAAATGCGTGATT    946
                     |||.|||.|.|||||.||.||.|||||.||.|||||.||.|||||.||||
BL01411___yqf    897 GGACTACCTCAATATGAAAAACATCGACGCCGACACTGACATGCGCGATT    946

BSNT_03782___    947 CATTCGGCAAGCTGACGAAAGACCCTTCGGATGAAGACCGCAAATCATAA    996
                     |.|||||.|||.||||||||||||   ...|||||||    ..|||||||
BL01411___yqf    947 CTTTCGGAAAGATGACGAAAGACC---AAAATGAAGA----GGATCATAA    989

BSNT_03782___    996 ----    996
                         
BL01411___yqf    990 ATAA    993


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.